Job Description P48940 Confidence 4.65% Date Tue Jul 17 17:05:10 BST 2012 Rank 33 Aligned Residues 67 % Identity 12% Template d1fsha_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	D	A	L	E	V	F	E	E	A	I	N	N	I	M	P	V	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P	E	R	R	T	T	L	G	L	R	W	L	V	N	Y	A	R	L	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D
Query Conservation
Alig confidence																																				.							.	.	.	.	.
Template Conservation																																				.							.	.	.	.	.
Template Sequence		T	V	K	S	D	M	S	A	I	V	R	V	M	Q	L	P	D	S	G	L	E	I	R	D	R	M	W	L	K	I	T	I	A	N	.	A	V	I	G	A	D	.	.	.	.	.	V	V	D	W	L	Y	T	H	V	E	G	F	K	E	R	R	E	A	R	K	Y	A	S	S	M	L	K
Template Known Secondary structure			S	S	S											S	T	T	S	S	S		S	S					T	T				S	S	.							.	.	.	.	.													S	S
Template Predicted Secondary structure																																				.							.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions