Job Description P48940 Confidence 2.08% Date Tue Jul 17 17:05:10 BST 2012 Rank 86 Aligned Residues 40 % Identity 23% Template c3n4qA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:terminase subunit ul89 protein; PDBTitle: human cytomegalovirus terminase nuclease domain, mn soaked Resolution 3.20 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	D	G	K	R	G	T	A	Q	R	I	L	Y	S	A	F	D	L	V	.	.	.	.	.	.	.	.	.	.	.	E	Q	R	S	G	R	D	A	L	E	V	F	E	E	A	I	N	N	I	M
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	G	R	D	K	A	L	A	V	E	Q	F	I	S	R	F	N	S	G	Y	I	K	A	S	Q	E	L	V	S	Y	T	I	K	L	S	H	D	P	I	E	Y	L	L	E	Q	I	Q	N	L	H
Template Known Secondary structure					T															T	T											S	S	S	B	T	T	B											T	T
Template Predicted Secondary structure
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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