Job Description P48940 Confidence 100.00% Date Tue Jul 17 17:05:10 BST 2012 Rank 10 Aligned Residues 132 % Identity 28% Template c3izbF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:40s ribosomal protein rps5 (s7p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution 8.80 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		H	N	S	K	L	V	T	K	L	I	N	K	I	M	L	D	.	.	.	.	G	K	R	G	T	A	Q	R	I	L	Y	S	A	F	D	L	V	E	Q	R	S	G	R	D	A	L	E	V	F	E	E	A	I	N	N	I	M	P	V	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.
Template Conservation
Template Sequence		A	Q	C	P	I	I	E	R	L	T	N	S	L	M	M	N	G	R	N	N	G	K	K	L	K	A	V	R	I	I	K	H	T	L	D	I	I	N	V	L	T	D	Q	N	P	I	Q	V	V	V	D	A	I	T	N	T	G	P	R	E	D	T	T	R	V	G	G	G	G	A	A	R	R	Q	A	V	D	V	S	P
Template Known Secondary structure																	S	S	S	S																							T	S														S		S		B							T	T							B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																								.	.
Query SS confidence																			.	.	.																								.	.
Query Sequence		E	R	R	T	T	L	G	L	R	W	L	V	N	Y	A	R	L	.	.	.	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D	A	A	N	N	T	G	G	.	.	A	V	K	K	R	E	D	T	H	K	M	A	E	A	N	K
Query Conservation																			.	.	.																								.	.
Alig confidence																			.	.	.																								.	.
Template Conservation
Template Sequence		L	R	R	V	N	Q	A	I	A	L	L	T	I	G	A	R	E	A	A	F	R	N	I	K	T	I	A	E	T	L	A	E	E	L	I	N	A	A	K	G	S	S	T	S	Y	A	I	K	K	K	D	E	L	E	R	V	A	K	S	N	R
Template Known Secondary structure																							T	T															T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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