Job Description P48940 Confidence 18.86% Date Tue Jul 17 17:05:10 BST 2012 Rank 17 Aligned Residues 74 % Identity 19% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		62	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure													.																																	.	.	.	.	.
Query SS confidence													.																																	.	.	.	.	.
Query Sequence		F	E	E	A	I	N	N	I	M	P	V	.	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P	E	R	R	T	T	L	G	L	R	W	L	.	.	.	.	.	V	N	Y	A	R	L	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D	A	A	N	N	T	G	G	A	V
Query Conservation													.																																	.	.	.	.	.
Alig confidence													.																																	.	.	.	.	.
Template Conservation
Template Sequence		L	I	R	A	I	K	K	L	K	A	L	G	T	G	F	G	I	I	P	V	G	G	T	Y	L	I	Q	S	V	P	A	E	L	N	M	D	H	T	V	V	L	Q	L	A	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	K	W	E	T	E	R	A	R	Q	V	L	E	H	L	L	K	E	G	L	A	W
Template Known Secondary structure										G	G	G	S	T	T							T	T							S																T	T	T	S												T																	T	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions