Return to main results Retrieve Phyre Job Id

Job DescriptionP48940
Confidence2.05%DateTue Jul 17 17:05:10 BST 2012
Rank88Aligned Residues33
% Identity12%Templatec2lfhA_
PDB info PDB header:dna binding protein inhibitorChain: A: PDB Molecule:dna-binding protein inhibitor id-3; PDBTitle: solution nmr structure of the helix-loop-helix domain of human id32 protein, northeast structural genomics consortium target hr3111a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50........ .60.........70.....
Predicted Secondary structure 



.......
Query SS confidence 















. . . . . . .
















Query Sequence  LYSAFDLVEQRSGRDA. . . . . . . LEVFEEAINNIMPVLEV
Query Conservation     

  
      

.......
 

  

 
  
  

Alig confidence 















.......
















Template Conservation 

  
  

  

      



  

  

 

  

 
Template Sequence  MNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVV
Template Known Secondary structure 




TT





Template Predicted Secondary structure 










Template SS confidence 







































   2930.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions