Job Description P48940 Confidence 15.87% Date Tue Jul 17 17:05:10 BST 2012 Rank 18 Aligned Residues 74 % Identity 16% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		F	E	E	A	I	N	N	I	M	P	V	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P	E	R	R	T	T	L	G	L	R	W	L	.	.	.	.	.	V	N	Y	A	R	L	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D	A	A	N	N	T	G	G	A	V
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	S	I	D	M	L	K	S	L	E	C	F	E	I	F	Q	I	R	G	K	K	F	L	R	S	V	P	N	E	L	T	S	D	Q	T	K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	W	E	A	V	R	S	K	S	A	L	D	E	M	V	A	N	G	L	L	W
Template Known Secondary structure										T	T	T									T	T							S	S	S				T	T							T	T	T	T	T	S			B												S													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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