Job Description P0A0K3 Confidence 99.97% Date Tue Jul 17 17:05:07 BST 2012 Rank 28 Aligned Residues 164 % Identity 23% Template c3l3bA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:es1 family protein; PDBTitle: crystal structure of isoprenoid biosynthesis protein with2 amidotransferase-like domain from ehrlichia chaffeensis at 1.90a3 resolution Resolution 1.90 Å

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		4	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																		.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure									.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	I	L	A	.	.	.	.	.	N	E	F	E	D	I	E	Y	S	S	P	K	E	A	L	E	N	A	G	F	N	T	V	V	I	G	D	T	A	N	S	E	V	V	G	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	V	T	V	D	V	G	I	A	E	A	K
Query Conservation									.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	A	V	I	L	A	G	C	G	H	M	D	G	S	E	I	R	E	A	V	L	V	M	L	E	L	D	R	H	N	V	N	F	K	C	F	A	P	N	K	N	Q	K	Q	V	V	D	H	K	K	K	E	S	V	G	E	V	R	N	I	L	V	E	S	A	R	I	A	R	G	S	V	Y	D	I	E	Q	I	R
Template Known Secondary structure										S	S	T	T	T	S																T	T									S	S	B		S					T	T	T	T				S				B									T	T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		P	E	D	Y	D	A	L	L	I	P	G	G	F	S	P	D	H	L	R	G	D	.	.	.	.	.	.	.	.	T	E	G	R	Y	G	T	F	A	K	Y	F	T	K	N	D	V	P	T	F	A	I	C	H	G	P	Q	I	L	I	D	T	D	D	L	K	G	R	T	L	T	A	V	L	N	V	R	K	D	L	S
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		V	E	E	F	D	M	L	V	I	P	G	G	Y	G	V	A	K	N	F	S	N	L	F	D	E	D	N	D	Y	I	L	P	E	F	K	N	A	V	R	E	F	Y	N	A	K	K	P	I	G	A	V	C	I	S	P	A	V	V	V	A	L	L	K	D	I	A	K	V	K	V	T	I	G	.	.	.	E	L	I	D
Template Known Secondary structure		G	G	G		S															B	S	T	T	S						B														T	T							T	T										T	T	T									.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160
		134	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	G	A	H	V	V	D	E	S	.	.	.	.	.	V	V	V	D	N	N	I	V	T	S	R	V	.	.	.	.	.	.	.	.	.	.	P	D	D	L	D	D	F	N	R	E	I	V	K	Q	L
Query Conservation												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	G	G	V	H	V	D	C	P	T	I	K	S	V	K	D	D	V	N	R	I	F	S	C	S	A	Y	M	R	N	D	S	L	Y	N	V	Y	L	G	I	Q	D	M	I	S	S	M	V	N	Y	L
Template Known Secondary structure				T								T	T						T	T	T	T						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions