Job Description P0A0K3 Confidence 97.31% Date Tue Jul 17 17:05:07 BST 2012 Rank 55 Aligned Residues 89 % Identity 19% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		M	T	K	K	V	A	I	I	L	A	N	E	F	E	D	I	E	Y	S	S	P	K	E	A	L	E	N	A	G	F	N	T	V	V	I	G	D	T	A	N	S	E	V	V	G	K	H	G	E	K	V	T	V	D	V	G	I	A	E	A	K	P	E	D	Y	D	A	L	L	I	P	G	G	F	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	V	I	G	I	T	G	Q	.	.	.	.	.	.	.	.	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	P	I	A	L	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L
Template Known Secondary structure												.	.	.	.	.	.	.	.										T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G							T		S								S				G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
									75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	P	D	H	L	R	G	D	T	E	G	R	Y	G	T	F	A	K	Y	F	T	K	N	D	V	P	T	F	A	I	C	H	G	P	Q	I	L	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	R	G	X	Q	L	V	N
Template Known Secondary structure		G	T					T	T																							T							T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions