19/07/2012 12:55:42 : INFO  : Run start: Thu Jul 19 12:55:42 BST 2012
19/07/2012 12:55:42 : INFO  : Initialised job
19/07/2012 12:55:42 : INFO  : Initialised job:
Sequence
>batch____
MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEA
KPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGR
TLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNREIVKQLQ

19/07/2012 12:55:42 : INFO  : Checked sequence
19/07/2012 12:55:42 : INFO  : Finding homologues with PSI-BLAST
19/07/2012 12:55:42 : INFO  : PSI-BLAST 3 iterations
19/07/2012 12:56:56 : INFO  : PSI-BLAST 5 iterations
19/07/2012 12:58:16 : INFO  : Finished PSI-BLAST
19/07/2012 12:58:16 : INFO  : Running Buildali to generate a3m file
19/07/2012 13:06:08 : INFO  : Converting to HMM
19/07/2012 13:06:08 : INFO  : Calibrating HMM
19/07/2012 13:06:12 : INFO  : Searching HMM database
19/07/2012 13:09:07 : INFO  : Finished buildali
19/07/2012 13:09:07 : INFO  : Predicting secondary structure
19/07/2012 13:09:07 : INFO  : Predicted secondary structure (PSI-Pred)
19/07/2012 13:09:07 : INFO  : Predicting Disordered regions
19/07/2012 13:09:07 : INFO  : Predicted Disorder (Disopred)
19/07/2012 13:09:07 : INFO  : Running memsat_svm check
19/07/2012 13:13:32 : INFO  : Globular protein
19/07/2012 13:13:32 : INFO  : Predicted Transmembrane (memsat_svm) ID '092efac2c43050e4'
19/07/2012 13:13:32 : INFO  : Initialising fold library search
19/07/2012 13:13:32 : INFO  : Initialised search input
19/07/2012 13:13:32 : INFO  : Building Ensemble models
19/07/2012 13:13:32 : INFO  : Building hh.c3fseB_.model.1.pdb
19/07/2012 13:13:33 : INFO  : Building hh.c3uk7B_.model.2.pdb
19/07/2012 13:13:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/hh.c3uk7B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/c3uk7B_.4.pdb
19/07/2012 13:13:33 : INFO  : Building hh.d1g2ia_.model.3.pdb
19/07/2012 13:13:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/hh.d1g2ia_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/d1g2ia_.5.pdb
19/07/2012 13:13:34 : INFO  : Building hh.d1oi4a1.model.4.pdb
19/07/2012 13:13:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/hh.d1oi4a1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/d1oi4a1.7.pdb
19/07/2012 13:13:34 : INFO  : Building hh.c2vrnA_.model.5.pdb
19/07/2012 13:13:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/hh.c2vrnA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/092efac2c43050e4/c2vrnA_.11.pdb
19/07/2012 13:13:34 : INFO  : Building c3fseB_.1.pdb
19/07/2012 13:13:35 : INFO  : Building c3cneD_.2.pdb
19/07/2012 13:13:35 : INFO  : Building c4e08B_.3.pdb
19/07/2012 13:13:35 : INFO  : Building c3uk7B_.4.pdb
19/07/2012 13:13:36 : INFO  : Building d1g2ia_.5.pdb
19/07/2012 13:13:36 : INFO  : Building c3ot1B_.6.pdb
19/07/2012 13:13:37 : INFO  : Building d1oi4a1.7.pdb
19/07/2012 13:13:37 : INFO  : Building d1p5fa_.8.pdb
19/07/2012 13:13:37 : INFO  : Building d1u9ca_.9.pdb
19/07/2012 13:13:38 : INFO  : Building c3kklA_.10.pdb
19/07/2012 13:13:38 : INFO  : Building c2vrnA_.11.pdb
19/07/2012 13:13:38 : INFO  : Building d1qvwa_.12.pdb
19/07/2012 13:13:38 : INFO  : Building c3ewnA_.13.pdb
19/07/2012 13:13:39 : INFO  : Building c3efeC_.14.pdb
19/07/2012 13:13:39 : INFO  : Building c3n7tA_.15.pdb
19/07/2012 13:13:40 : INFO  : Building d2ab0a1.16.pdb
19/07/2012 13:13:40 : INFO  : Building c3f5dA_.17.pdb
19/07/2012 13:13:40 : INFO  : Building d1n57a_.18.pdb
19/07/2012 13:13:40 : INFO  : Building c3bhnA_.19.pdb
19/07/2012 13:13:41 : INFO  : Building c3nooB_.20.pdb
19/07/2012 13:13:45 : INFO  : Finished HH model building
19/07/2012 13:13:45 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/07/2012 13:13:49 : INFO  : html domain output complete ID '092efac2c43050e4'
19/07/2012 13:44:32 : INFO  : Run end  : Thu Jul 19 13:44:32 BST 2012
