Phyre 2 alignment of P0A0K3 with c2w7tA_

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Job Description | P0A0K3
Confidence | 95.22% | Date | Tue Jul 17 17:05:07 BST 2012
Rank | 71 | Aligned Residues | 44
% Identity | 27% | Template | c2w7tA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:putative cytidine triphosphate synthase; | PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | D | Y | D | A | L | L | I | P | G | G | F | S | P | D | H | L | R | G | D | T | E | G | R | Y | G | T | F | A | K | Y | F | T | K | N | D | V | P | T | F | A | I | C | H | G | P | Q | I | L | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | L | G | C | D | G | I | F | V | P | G | G | F | G | N | R | . | . | . | . | . | G | V | D | G | K | C | A | A | A | Q | V | A | R | M | N | N | I | P | Y | F | G | V | L | . | G | M | Q | V | A | V
Template Known Secondary structure |  |  | T |  | S |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 382 | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |  | 420 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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