Emaill.a.kelley@imperial.ac.uk
DescriptionP14738
DateTue Jul 17 17:05:09 BST 2012
Unique Job ID03f4effed6783aa6

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1n67A_



99.9 23 PDB header:cell adhesion
Chain: A: PDB Molecule:clumping factor;
PDBTitle: clumping factor a from staphylococcus aureus
2c3at0A_



99.9 20 PDB header:cell adhesion/blood clotting
Chain: A: PDB Molecule:clumping factor b;
PDBTitle: structural and biochemical characterization of clfb:ligand2 interactions
3c2vr3B_



99.9 23 PDB header:cell adhesion
Chain: B: PDB Molecule:clumping factor a;
PDBTitle: structural and biochemical characterization of fibrinogen2 binding to clfa from staphylocccus aureus
4c1r19B_



99.8 19 PDB header:cell adhesion
Chain: B: PDB Molecule:fibrinogen-binding protein sdrg;
PDBTitle: crystal structure analysis of s.epidermidis adhesin sdrg2 binding to fibrinogen (apo structure)
5c3irpX_



99.4 13 PDB header:cell adhesion
Chain: X: PDB Molecule:uro-adherence factor a;
PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution
6d1n67a1



99.4 33 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Bacterial adhesins
Family:Fibrinogen-binding domain
7d1r17a1



99.3 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Bacterial adhesins
Family:Fibrinogen-binding domain
8d1r17a2



99.1 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Bacterial adhesins
Family:Fibrinogen-binding domain
9d1n67a2



98.9 16 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Bacterial adhesins
Family:Fibrinogen-binding domain
10c2f6aA_



98.1 12 PDB header:cell adhesion/structural protein
Chain: A: PDB Molecule:collagen adhesin;
PDBTitle: collagen adhesin and collagen complex structure
11c2z1pA_



96.9 13 PDB header:cell adhesion
Chain: A: PDB Molecule:collagen adhesin protein;
PDBTitle: the enterococcus faecalis mscramm ace binds its ligands by2 the collagen hug model
12c2jp3A_



81.4 45 PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
13c2jo1A_



77.7 23 PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
14c3kdpG_



68.7 35 PDB header:hydrolase
Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
15c3kdpH_



68.7 35 PDB header:hydrolase
Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the sodium-potassium pump
16c2zxeG_



64.7 18 PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:phospholemman-like protein;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
17c2l2tA_



61.2 30 PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: solution nmr structure of the erbb4 dimeric membrane domain
18c3n23E_



57.5 38 PDB header:hydrolase
Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump
19c1m57H_



52.0 17 PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant))
20c2k9yB_



38.8 24 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
21c2k9yA_



not modelled 34.4 24 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
22c2k1kB_



not modelled 32.1 31 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
23c2k1lA_



not modelled 32.1 31 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
24c2k1kA_



not modelled 32.1 31 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
25c2k1lB_



not modelled 32.1 31 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
26c1iijA_



not modelled 28.5 22 PDB header:signaling protein
Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase;
PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment
27d3ehbb2



not modelled 26.4 13 Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
28d3dtub2



not modelled 25.9 17 Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
29d1fftb2



not modelled 25.6 8 Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
30d1d3va_



not modelled 24.5 13 Fold:Arginase/deacetylase
Superfamily:Arginase/deacetylase
Family:Arginase-like amidino hydrolases
31c1qleB_



not modelled 24.4 12 PDB header:oxidoreductase/immune system
Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii;
PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
32c1ar1B_



not modelled 24.4 12 PDB header:complex (oxidoreductase/antibody)
Chain: B: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure at 2.7 angstrom resolution of the paracoccus2 denitrificans two-subunit cytochrome c oxidase complexed3 with an antibody fv fragment
33c3of4A_



not modelled 23.8 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a fmn/fad- and nad(p)h-dependent nitroreductase2 (nfnb, il2077) from idiomarina loihiensis l2tr at 1.90 a resolution
34d2frea1



not modelled 22.0 25 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
35d1vkwa_



not modelled 21.3 25 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:Putative nitroreductase TM1586
36c3g2eA_



not modelled 21.3 35 PDB header:oxidoreductase
Chain: A: PDB Molecule:oorc subunit of 2-oxoglutarate:acceptor oxidoreductase;
PDBTitle: structure of putative oorc subunit of 2-oxoglutarate:acceptor2 oxidoreductase from campylobacter jejuni
37c2wqfA_



not modelled 21.0 20 PDB header:oxidoreductase
Chain: A: PDB Molecule:copper induced nitroreductase d;
PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn
38c2f5uA_



not modelled 21.0 21 PDB header:viral protein
Chain: A: PDB Molecule:virion protein ul25;
PDBTitle: structural characterization of the ul25 dna packaging2 protein from herpes simplex virus type 1
39d2ifaa1



not modelled 21.0 20 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
40c2h0uA_



not modelled 19.1 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph-flavin oxidoreductase;
PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori
41c2okrF_



not modelled 18.3 63 PDB header:transferase
Chain: F: PDB Molecule:map kinase-activated protein kinase 2;
PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
42c2okrC_



not modelled 18.3 63 PDB header:transferase
Chain: C: PDB Molecule:map kinase-activated protein kinase 2;
PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
43c3rkoF_



not modelled 17.6 9 PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
44c3m5kA_



not modelled 17.2 40 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (bdi_1728) from parabacteroides distasonis atcc 85033 at 1.86 a resolution
45d1bkja_



not modelled 17.0 38 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
46c2hayD_



not modelled 16.8 30 PDB header:oxidoreductase
Chain: D: PDB Molecule:putative nad(p)h-flavin oxidoreductase;
PDBTitle: the crystal structure of the putative nad(p)h-flavin oxidoreductase2 from streptococcus pyogenes m1 gas
47c3g14B_



not modelled 16.7 30 PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of nitroreductase family protein (yp_877874.1) from2 clostridium novyi nt at 1.75 a resolution
48c3ge5A_



not modelled 16.4 30 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h:fmn oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310)2 from porphyromonas gingivalis w83 at 1.70 a resolution
49c3j0cG_



not modelled 16.0 24 PDB header:virus
Chain: G: PDB Molecule:e1 envelope glycoprotein;
PDBTitle: models of e1, e2 and cp of venezuelan equine encephalitis virus tc-832 strain restrained by a near atomic resolution cryo-em map
50c2wzvB_



not modelled 14.9 25 PDB header:oxidoreductase
Chain: B: PDB Molecule:nfnb protein;
PDBTitle: crystal structure of the fmn-dependent nitroreductase nfnb2 from mycobacterium smegmatis
51c3kwkA_



not modelled 14.5 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (np_809094.1) from bacteroides thetaiotaomicron vpi-3 5482 at 1.54 a resolution
52c3ek3A_



not modelled 13.9 20 PDB header:flavoprotein
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of nitroreductase with bound fmn (yp_211706.1) from2 bacteroides fragilis nctc 9343 at 1.70 a resolution
53d1kqba_



not modelled 13.8 14 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
54c3n2sD_



not modelled 13.3 25 PDB header:oxidoreductase
Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase;
PDBTitle: structure of nfra1 nitroreductase from b. subtilis
55c1qcrD_



not modelled 13.1 33 PDB header:
PDB COMPND:
56c3b9yA_



not modelled 13.1 18 PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter family rh-like protein;
PDBTitle: crystal structure of the nitrosomonas europaea rh protein
57c3pxvD_



not modelled 12.2 40 PDB header:oxidoreductase
Chain: D: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase with bound fmn (dhaf_2018) from2 desulfitobacterium hafniense dcb-2 at 2.30 a resolution
58d2csba2



not modelled 12.1 60 Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Topoisomerase V repeat domain
59c2w2hB_



not modelled 12.1 21 PDB header:rna-binding protein
Chain: B: PDB Molecule:cyclin-t1;
PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
60c2r01A_



not modelled 12.1 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a putative fmn-dependent nitroreductase (ct0345)2 from chlorobium tepidum tls at 1.15 a resolution
61d1q90m_



not modelled 12.0 50 Fold:Single transmembrane helix
Superfamily:PetM subunit of the cytochrome b6f complex
Family:PetM subunit of the cytochrome b6f complex
62d1ppjw_



not modelled 12.0 17 Fold:Single transmembrane helix
Superfamily:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
63d1f5va_



not modelled 11.6 25 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
64c2b9n6_



not modelled 11.6 9 PDB header:ribosome
Chain: 6: PDB Molecule:50s ribosomal protein l33;
PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf2,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400.
65d2zjr11



not modelled 11.6 9 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L33p
66c3e39A_



not modelled 11.6 38 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (dde_0787) from desulfovibrio desulfuricans subsp. at 1.70 a3 resolution
67c2l2oA_



not modelled 11.5 33 PDB header:unknown function
Chain: A: PDB Molecule:upf0727 protein c6orf115;
PDBTitle: solution structure of human hspc280 protein
68d2f93b1



not modelled 11.4 40 Fold:Transmembrane helix hairpin
Superfamily:Htr2 transmembrane domain-like
Family:Htr2 transmembrane domain-like
69c2f93B_



not modelled 11.4 40 PDB header:membrane protein
Chain: B: PDB Molecule:sensory rhodopsin ii transducer;
PDBTitle: k intermediate structure of sensory rhodopsin ii/transducer complex in2 combination with the ground state structure
70d1vfra_



not modelled 11.3 43 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
71d3cx5i1



not modelled 11.3 11 Fold:Single transmembrane helix
Superfamily:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
72c3gr3B_



not modelled 11.2 38 PDB header:flavoprotein
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase-like family protein (pnba,2 bh06130) from bartonella henselae str. houston-1 at 1.45 a resolution
73c3ge6B_



not modelled 11.1 33 PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (exig_2970) from exiguobacterium sibiricum 255-15 at 1.85 a3 resolution
74c2hg5D_



not modelled 11.1 20 PDB header:membrane protein
Chain: D: PDB Molecule:kcsa channel;
PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter
75c3bm2B_



not modelled 11.1 10 PDB header:oxidoreductase
Chain: B: PDB Molecule:protein ydja;
PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor
76c2bbjB_



not modelled 11.0 11 PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
77c1bhbA_



not modelled 10.9 38 PDB header:photoreceptor
Chain: A: PDB Molecule:bacteriorhodopsin;
PDBTitle: three-dimensional structure of (1-71) bacterioopsin2 solubilized in methanol-chloroform and sds micelles3 determined by 15n-1h heteronuclear nmr spectroscopy
78c1zrtD_



not modelled 10.8 29 PDB header:oxidoreductase/metal transport
Chain: D: PDB Molecule:cytochrome c1;
PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound
79c2kjfA_



not modelled 10.8 50 PDB header:antimicrobial protein
Chain: A: PDB Molecule:carnocyclin-a;
PDBTitle: the solution structure of the circular bacteriocin2 carnocyclin a (ccla)
80c3hj9A_



not modelled 10.8 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of a putative nitroreductase (reut_a1228) from2 ralstonia eutropha jmp134 at 2.00 a resolution
81d1zcha1



not modelled 10.7 25 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
82c3eofB_



not modelled 10.7 50 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase (yp_213212.1) from2 bacteroides fragilis nctc 9343 at 1.99 a resolution
83c2f95B_



not modelled 10.6 40 PDB header:membrane protein
Chain: B: PDB Molecule:sensory rhodopsin ii transducer;
PDBTitle: m intermediate structure of sensory rhodopsin ii/transducer complex in2 combination with the ground state structure
84c3koqC_



not modelled 10.4 38 PDB header:oxidoreductase
Chain: C: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a nitroreductase family protein (cd3355) from2 clostridium difficile 630 at 1.58 a resolution
85c2ktrA_



not modelled 10.2 29 PDB header:signaling protein, transport protein
Chain: A: PDB Molecule:sequestosome-1;
PDBTitle: nmr structure of p62 pb1 dimer determined based on pcs
86c3bemA_



not modelled 10.2 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn;
PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution
87c3e10B_



not modelled 10.0 50 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadh oxidase;
PDBTitle: crystal structure of putative nadh oxidase (np_348178.1)2 from clostridium acetobutylicum at 1.40 a resolution
88d1dd3a1



not modelled 9.8 24 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
89c1x3nA_



not modelled 9.7 23 PDB header:transferase
Chain: A: PDB Molecule:propionate kinase;
PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium
90c3ol4B_



not modelled 9.7 50 PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c
91d1pbua_



not modelled 9.7 25 Fold:Ferredoxin-like
Superfamily:eEF1-gamma domain
Family:eEF1-gamma domain
92c2b2hA_



not modelled 9.7 5 PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter;
PDBTitle: ammonium transporter amt-1 from a. fulgidus (as)
93c2j5dA_



not modelled 9.6 23 PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
94c2i7hE_



not modelled 9.6 25 PDB header:oxidoreductase
Chain: E: PDB Molecule:nitroreductase-like family protein;
PDBTitle: crystal structure of the nitroreductase-like family protein from2 bacillus cereus
95d1h2sb_



not modelled 9.5 40 Fold:Transmembrane helix hairpin
Superfamily:Htr2 transmembrane domain-like
Family:Htr2 transmembrane domain-like
96c1h2sB_



not modelled 9.5 40 PDB header:membrane protein
Chain: B: PDB Molecule:sensory rhodopsin ii transducer;
PDBTitle: molecular basis of transmenbrane signalling by sensory2 rhodopsin ii-transducer complex
97d1mgta2



not modelled 9.4 25 Fold:Ribonuclease H-like motif
Superfamily:Methylated DNA-protein cysteine methyltransferase domain
Family:Methylated DNA-protein cysteine methyltransferase domain
98c3iddA_



not modelled 9.3 4 PDB header:isomerase
Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent
PDBTitle: cofactor-independent phosphoglycerate mutase from2 thermoplasma acidophilum dsm 1728
99c3hoiA_



not modelled 9.2 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:fmn-dependent nitroreductase bf3017;
PDBTitle: crystal structure of fmn-dependent nitroreductase bf3017 from2 bacteroides fragilis nctc 9343 (yp_212631.1) from bacteroides3 fragilis nctc 9343 at 1.55 a resolution