Job Description P14738 Confidence 99.39% Date Tue Jul 17 17:05:09 BST 2012 Rank 5 Aligned Residues 261 % Identity 13% Template c3irpX_ PDB info PDB header:cell adhesion Chain: X: PDB Molecule:uro-adherence factor a; PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution Resolution 1.50 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																													.
Query SS confidence																										.	.																																													.
Query Sequence		V	E	T	G	T	D	V	T	S	K	V	T	V	E	I	G	S	I	E	G	H	N	N	T	.	.	N	K	V	E	P	H	A	G	Q	R	A	V	L	K	Y	K	L	K	F	E	N	G	L	H	Q	G	D	Y	F	D	F	T	L	S	N	N	V	N	T	H	G	V	S	T	.	A	R	K	V	P	E	I	K	N
Query Conservation																										.	.																																													.
Alig confidence																										.	.																																													.
Template Conservation
Template Sequence		A	Q	S	G	R	N	V	N	H	L	V	F	A	N	T	S	Y	E	I	L	G	G	G	K	K	Y	N	Q	V	F	M	T	M	D	G	K	L	K	I	K	I	D	Y	T	V	D	D	S	V	V	E	G	D	Y	F	T	V	D	F	G	K	Y	I	H	P	G	T	S	R	K	P	Y	R	V	N	N	I	H	D	A
Template Known Secondary structure							B		G	G	G											S	T	T	G	G	G	T				T	T	T	T													T	T			T	T								T	T	T				S	S	S	B	S	S									T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		268	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure													.																																			.
Query SS confidence													.																																			.
Query Sequence		G	S	V	V	M	A	T	G	E	V	L	.	E	G	G	K	I	R	Y	T	F	T	N	D	I	E	D	K	V	D	V	T	A	E	L	E	I	N	L	F	I	D	P	K	T	V	.	Q	T	N	G	N	Q	T	I	T	S	T	L	N	E	E	Q	T	S	K	E	L	D	V	K	Y	K	D	G	I	G	N	Y	Y
Query Conservation													.																																			.
Alig confidence													.																																			.
Template Conservation
Template Sequence		N	G	R	T	I	A	I	G	S	Y	D	S	A	T	N	T	A	K	Y	T	F	T	N	Y	V	D	I	Y	N	N	V	R	G	S	F	S	L	L	S	W	P	F	K	E	L	V	T	T	D	K	Q	S	V	P	V	G	I	T	V	A	G	E	D	Y	T	Q	N	V	I	F	N	Y	G	N	R	T	V	P	V	I
Template Known Secondary structure		T											T	T	T	T								T						S	S													T	T	T	S		S	T	T										T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	N	G	S	I	E	T	F	N	K	A	N	N	R	F	S	H	V	A	F	I	K	P	N	N	G	K	T	T	S	V	T	V	T	G	T	L	M	K	G	S	N	Q	N	G	N	Q	P	K	V	R	I	F	E	Y	L	G	N	N	E	D	I	A	K	S	V	Y	A	N	T	T	D	T	S	K	F	K	E
Query Conservation
Alig confidence					.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		S	D	I	.	.	.	.	.	.	N	Y	L	T	K	D	F	A	E	F	T	T	Y	I	N	Q	N	R	A	F	N	T	G	S	K	V	R	L	S	G	Q	G	F	K	F	T	S	P	D	E	I	E	.	.	.	.	.	.	V	Y	K	V	L	N	N	S	Q	F	R	D	S	F	S	P	D	Y	A	N	L	T	Q
Template Known Secondary structure					.	.	.	.	.	.					S	S	B									T	T				B											S						G	G	G			.	.	.	.	.	.					S	S	G	G	G	S		T	T	S				G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		552	.	.							.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.							.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		V	T	S	N	M	S	G	N	L	N	L	Q	N	N	G	S	Y	S	L	N	I	E	N	L	D	K	.	T	Y	V	V	H	Y	D	G	E	Y	L	N	G	T	D
Query Conservation																												.
Alig confidence										.	.	.																.
Template Conservation										.	.	.
Template Sequence		V	R	N	P	K	I	I	I	.	.	.	N	S	D	G	S	A	T	V	D	L	G	D	I	G	T	L	G	Y	I	I	R	S	K	P	N	T	L	P	D	F	S
Template Known Secondary structure			S	S						.	.	.		T	T	S										B	T													T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		620	.	.	.	.	.	.	.				.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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