Job Description P14738 Confidence 99.83% Date Tue Jul 17 17:05:09 BST 2012 Rank 4 Aligned Residues 293 % Identity 19% Template c1r19B_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:fibrinogen-binding protein sdrg; PDBTitle: crystal structure analysis of s.epidermidis adhesin sdrg2 binding to fibrinogen (apo structure) Resolution 3.51 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		T	D	V	T	S	K	V	T	V	E	I	G	S	I	E	.	.	G	H	N	N	T	N	K	V	E	P	H	A	G	Q	R	A	V	L	K	Y	K	L	K	F	E	N	G	L	H	Q	G	D	Y	F	D	F	T	L	S	N	N	V	N	T	H	G	V	S	T	A	R	K	V	P	E	I	K	N	G	S	V	V	M
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		S	N	V	N	H	L	I	K	V	T	D	Q	S	I	T	E	G	Y	D	D	S	D	G	I	I	K	A	H	D	A	E	N	L	I	Y	D	V	T	F	E	V	D	D	K	V	K	S	G	T	M	T	V	N	I	D	K	N	T	V	P	S	D	L	T	D	S	F	A	I	P	K	I	K	D	N	S	G	E	I	I
Template Known Secondary structure					G	G	G	B										S		S	S		T	T				T	T	T	T											B		S	S												T	T			S		S	S		S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		273	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure								.																																							.
Query SS confidence								.																																							.
Query Sequence		A	T	G	E	V	L	.	E	G	G	K	I	R	Y	T	F	T	N	D	I	E	D	K	V	D	V	T	A	E	L	E	I	N	L	F	I	D	P	K	T	V	Q	T	N	G	.	N	Q	T	I	T	S	T	L	N	E	E	Q	T	S	K	E	L	D	V	K	Y	K	D	G	I	G	N	Y	Y	A	N	L	N	G
Query Conservation								.																																							.
Alig confidence								.											.	.	.	.	.																								.
Template Conservation																			.	.	.	.	.
Template Sequence		A	T	G	T	Y	D	N	T	N	K	Q	I	T	Y	T	F	T	.	.	.	.	.	Y	E	N	I	K	A	H	L	K	L	T	S	Y	I	D	K	S	K	V	P	N	N	N	T	K	L	D	V	E	Y	K	T	A	L	S	S	V	N	K	T	I	T	V	E	Y	Q	K	P	N	E	N	R	T	A	N	L	Q	S
Template Known Secondary structure								T	T	T	T								.	.	.	.	.			S													T	T	T			S	T	T										T	T																		T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		S	I	E	T	F	N	K	A	N	N	R	F	S	H	V	A	F	I	K	P	N	N	G	K	T	T	S	V	T	V	T	G	T	L	M	K	G	S	N	Q	N	G	N	Q	P	.	.	K	V	R	I	F	E	Y	L	G	N	N	E	D	I	A	K	S	V	Y	A	N	T	T	D	T	S	K	F	K	E	V	T	S
Query Conservation																																															.	.
Alig confidence																																															.	.							.															.	.
Template Conservation																																																							.															.	.
Template Sequence		M	F	T	N	I	D	T	K	N	H	T	V	E	Q	T	I	Y	I	N	P	L	R	Y	S	A	K	E	T	N	V	N	I	S	G	N	G	D	E	G	S	T	I	I	D	D	S	T	I	I	K	V	Y	K	.	V	G	D	N	Q	N	L	P	D	S	N	R	I	Y	.	.	D	Y	S	E	Y	E	D	V	T	N
Template Known Secondary structure								T	T	T	T									S	T	T														B		S	S		B		B		S	T	T								.			T	T					T	T	S			S	.	.		G	G	G	S
Template Predicted Secondary structure																																																							.															.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490		.	.	.	.	.	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		N	M	S	G	N	L	N	L	Q	N	N	G	S	Y	S	L	N	I	E	N	L	D	K	T	Y	V	V	H	Y	D	G	E	Y	L	N	G	T	D	.	E	V	D	F	R	T	Q	M	V	G	H	P	E	Q	L	Y	K	Y	Y	Y	D	R	G	Y	T	L	T	W	D	N	G	L	V	L	Y
Query Conservation																																								.
Alig confidence									.	.																														.											.	.	.	.
Template Conservation									.	.																																									.	.	.	.
Template Sequence		D	D	Y	A	Q	L	G	.	.	N	N	N	D	V	N	I	N	F	G	N	I	D	S	P	Y	I	I	K	V	I	S	K	Y	D	P	N	K	Y	T	T	I	Q	Q	T	V	T	M	Q	T	.	.	.	.	T	I	N	E	Y	T	G	E	F	R	T	A	S	Y	D	N	T	I	A	F	S
Template Known Secondary structure		G	G	G					.	.	S	S	S											S																											.	.	.	.				T	T	T	T
Template Predicted Secondary structure									.	.																																									.	.	.	.
Template SS confidence
		515	.	.	.	.	520	.			.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.					.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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