Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5I3
Confidence98.77%DateTue Jul 30 13:02:03 BST 2013
Rank13Aligned Residues109
% Identity17%Templatec4h0aB_
PDB info PDB header:unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein (sav1118) from2 staphylococcus aureus subsp. aureus mu50 at 1.90 a resolution
Resolution1.90 Å
Model Dimensions (Å)X:43.626 Y:47.907 Z:39.401

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100....
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  SGLGVPRHRRKRHISARDMSALLDYHNHIRASVHPPAANMEYMVWDEQLARSAEAWATQC
Query Conservation        
              

  

  
  


 

 
  
 

 


  
   
  
Alig confidence 
































.....





















Template Conservation                       

 
 
  
   .....

 

     
   
  

 

Template Sequence  NSTSEEHNKRPVEQNPNQLISLYEVTNEXRKLK. . . . . GLKPLKINSDLAHIASNNLYEA
Template Known Secondary structure  TS








TTT.....T




Template Predicted Secondary structure 











.....







Template SS confidence 



























































   210.........220.........230.........240.. .......250.........260....
 
   105....110... ......120.........130.........140.........150..
Predicted Secondary structure 








............

















Query SS confidence 








. . . . . . . . . . . .






































Query Sequence  IWTHGPSQL. . . . . . . . . . . . MKYVGQNLSIHSGRFRSVVDLVRSWSEEKRHYSFPAPKD
Query Conservation     

    ............    



             
  
  
           
Alig confidence 








............













...











..........
Template Conservation 
      
     
    
      




    
...   

  
 

 ..........
Template Sequence  TSSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFND. . . VPTLIHSWXNSD. . . . . . . . . .
Template Known Secondary structure  T




BTT


SS

S...TS..........
Template Predicted Secondary structure 



















...


..........
Template SS confidence 



























































   265....270.........280.........290......... 300.........310.
 
   153......160.........170.........180.....
Predicted Secondary structure 















Query SS confidence 
































Query Sequence  CTPHCPWLCSGPVCSHYTQMVWASSSRLGCAIN
Query Conservation               








  
  



  
Alig confidence  ..............


















Template Conservation  ..............


 


    
  



 
Template Sequence  . . . . . . . . . . . . . . IHRSRLLNSKYDEXGGDVX
Template Known Secondary structure  ..............T
SS

Template Predicted Secondary structure  ..............





Template SS confidence 
































   316...320.........330....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D