Job Description A2A5I3 Confidence 100.00% Date Tue Jul 30 13:02:03 BST 2013 Rank 2 Aligned Residues 198 % Identity 26% Template c3nt8A_ PDB info PDB header:immune system Chain: A: PDB Molecule:ancylostoma secreted protein 1; PDBTitle: crystal structure of na-asp-1 Resolution 2.20 Å Model Dimensions (Å) X:47.063 Y:52.955 Z:52.927

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		P	N	T	T	L	V	Q	G	R	P	K	N	T	A	V	W	P	L	S	G	L	G	V	P	R	H	R	R	K	R	H	I	S	A	R	D	M	S	A	L	L	D	Y	H	N	H	I	R	A	S	V	H	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		C	E	D	G	L	C	T	K	G	P	D	V	P	E	T	N	Q	Q	C	P	S	N	T	G	.	.	.	.	.	.	.	M	T	D	S	V	R	D	T	F	L	S	V	H	N	E	F	R	S	S	V	A	R	G	L	E	P	D	A	L
Template Known Secondary structure				T	B														S		T	T			S	.	.	.	.	.	.	.																						T	T		S	B		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.																																																							.	.
Query SS confidence		.	.	.	.																																																							.	.
Query Sequence		.	.	.	.	P	P	A	A	N	M	E	Y	M	V	W	D	E	Q	L	A	R	S	A	E	A	W	A	T	Q	C	I	W	T	H	G	P	S	Q	L	M	K	Y	V	G	Q	N	L	S	I	H	S	G	R	F	R	S	V	V	.	.
Query Conservation		.	.	.	.																																																							.	.
Alig confidence		.	.	.	.																																																							.	.
Template Conservation
Template Sequence		G	G	N	A	P	K	A	A	K	M	L	K	M	V	Y	D	C	E	V	E	A	S	A	I	R	H	G	N	K	C	V	Y	Q	H	S	H	G	E	D	R	P	G	L	G	E	N	I	Y	K	T	S	V	L	K	F	D	K	N	K	A
Template Known Secondary structure		S	S	B				B	S	S		B																	T	T			S	S				T	T	T	S	T	T									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	L	V	R	S	W	S	E	E	K	R	H	Y	S	F	P	A	P	K	D	C	T	P	H	C	P	W	L	C	S	G	P	V	C	S	H	Y	T	Q	M	V	W	A	S	S	S	R	L	G	C	A	I	N	T	C	S	S	I
Query Conservation		.	.
Alig confidence		.	.																										.
Template Conservation																													.
Template Sequence		A	K	Q	A	S	Q	L	W	W	N	E	L	K	E	Y	G	V	G	P	S	N	V	L	T	T	A	L	.	W	N	R	P	N	M	Q	I	G	H	Y	T	Q	M	A	W	D	T	T	Y	K	L	G	C	A	V	V	F	C	N	D	F
Template Known Secondary structure											T					T				T	T		B						.		T		T	T												T	T												S	S	S
Template Predicted Secondary structure																													.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	W	G	N	T	W	Q	Q	A	V	Y	L	V	C	N	Y	A	I	K	G	N	W	I	G	E	A	P	Y	K	A	G	K	P	C	S	A	C	P	P	S	Y	Q	G	N	C	N	S	N	M	C	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	T	F	G	V	C	Q	Y	G	P	G	G	N	Y	M	G	H	V	I	Y	T	M	G	Q	P	C	S	Q	C	S	P	G	A	T	C	S	V	T	E	G	L	C	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.									S					T	T	S	B	S	S		B	S	S	T	T	T	T			T	T		B			T	T	T			B	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D