Job Description A2A5I3 Confidence 100.00% Date Tue Jul 30 13:02:03 BST 2013 Rank 6 Aligned Residues 176 % Identity 28% Template c1u53A_ PDB info PDB header:antibiotic Chain: A: PDB Molecule:secreted protein asp-2; PDBTitle: novel x-ray structure of na-asp-2, a pr-1 protein from the2 nematode parasite necator americanus and a vaccine antigen3 for human hookworm infection Resolution 1.56 Å Model Dimensions (Å) X:71.423 Y:48.695 Z:37.538

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	R	R	K	R	H	I	S	A	R	D	M	S	A	L	L	D	Y	H	N	H	I	R	A	S	V	H	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	A	N	M	E	Y	M	V	W	D	E	Q	L	A	R	S	A	E
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		C	P	D	N	.	.	G	M	S	E	E	A	R	Q	K	F	L	E	M	H	N	S	L	R	S	S	V	A	L	G	Q	A	K	D	G	A	G	G	N	A	P	K	A	A	K	M	K	T	M	A	Y	D	C	E	V	E	K	T	A	M
Template Known Secondary structure				S	S	.	.	S																						T	T			B		T	T	S	S	B				B	S	S		B
Template Predicted Secondary structure						.	.
Template SS confidence
		2	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	A	T	Q	C	I	W	T	H	G	P	S	Q	L	M	K	Y	V	G	Q	N	L	S	I	H	S	G	R	F	R	S	V	V	D	L	V	R	S	W	S	E	E	K	R	H	Y	S	F	P	A	P	K	D	C	T	P	H	C	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	A	K	Q	C	V	F	K	H	S	Q	P	N	Q	R	K	G	L	G	E	N	I	F	M	S	S	D	S	G	M	D	K	A	K	A	A	E	Q	A	S	K	A	W	F	G	E	L	A	E	K	G	V	G	Q	N	L	K	L	T
Template Known Secondary structure					T	T								G	G	G	S	T	T									S		T	T																T									S			B
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	C	S	G	P	V	C	S	H	Y	T	Q	M	V	W	A	S	S	S	R	L	G	C	A	I	N	T	C	S	S	I	N	V	W	G	N	T	W	Q	Q	A	V	Y	L	V	C	N	Y	A	I	K	G	N	W	I	G	E	A	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	L	F	S	R	G	V	G	H	Y	T	Q	M	V	W	Q	E	T	V	K	L	G	C	Y	V	E	A	C	S	N	M	C	.	.	.	.	.	.	.	.	.	.	Y	V	V	C	Q	Y	G	P	A	G	N	M	M	G	K	D	I
Template Known Secondary structure						T	T	T								T		T	T												S	S			.	.	.	.	.	.	.	.	.	.								S					T	T	S	B	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		Y	K	A	G	K	P	C	S	A	C	P	P	.	.	S	Y	Q	G	N	C	N	S
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		Y	E	K	G	E	P	C	S	K	C	E	N	C	D	K	E	K	G	L	C	S	A
Template Known Secondary structure		S		B	S	S	T	T	T	T		S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D