Job Description A2AAY5 Confidence 99.17% Date Tue Jul 30 13:00:07 BST 2013 Rank 226 Aligned Residues 108 % Identity 24% Template c4ikbB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-11; PDBTitle: crystal structure of snx11 px domain Resolution 1.78 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																	.	.															.	.	.
Query SS confidence																	.	.															.	.	.
Query Sequence		I	V	E	V	K	V	L	D	V	Q	K	R	R	V	P	.	.	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	.	.	.	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M
Query Conservation																	.	.															.	.	.
Alig confidence																	.	.															.	.	.																										.
Template Conservation																																																													.
Template Sequence		V	I	T	V	R	V	Q	D	P	R	V	Q	N	E	G	S	W	N	S	Y	V	D	Y	K	I	F	L	H	T	N	S	K	A	F	T	A	K	T	S	V	R	R	R	Y	R	E	F	V	W	L	R	K	Q	L	Q	R	N	A	G	.
Template Known Secondary structure														S	T	T	S	T	T														T	T	S	S		S	B																					T	.
Template Predicted Secondary structure																																																													.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																		.																						.
Template Conservation		.	.	.	.	.	.	.	.																		.																						.
Template Sequence		.	.	.	.	.	.	.	.	L	V	P	V	P	E	L	P	G	K	S	T	F	F	G	T	S	.	D	E	F	I	E	K	R	R	Q	G	L	Q	H	F	L	E	K	V	L	Q	S	.	V	V	L	L	S	D	S	Q	L	H	L	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	S								S				S	S	S		.																				T	S	.	S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																		.																						.
Template SS confidence
										76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.
		122	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D