Job Description A2AAY5 Confidence 98.87% Date Tue Jul 30 13:00:07 BST 2013 Rank 236 Aligned Residues 100 % Identity 23% Template c4hasA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-27; PDBTitle: crystal structure of px domain of human sorting nexin snx27 Resolution 1.74 Å

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		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	E	V	K	V	L	D	V	.	Q	K	R	R	V	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K
Query Conservation										.
Alig confidence										.																	.	.	.	.																										.	.	.	.	.	.
Template Conservation																											.	.	.	.																										.	.	.	.	.	.
Template Sequence		V	P	I	S	V	P	R	Y	K	H	V	E	Q	N	G	E	K	F	V	V	Y	N	V	Y	M	.	.	.	.	A	G	R	Q	L	C	S	K	R	Y	R	E	F	A	I	L	H	Q	N	L	K	R	E	F	A	.	.	.	.	.	.
Template Known Secondary structure															T	T											.	.	.	.	T	T																						T	T	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E
Query Conservation
Alig confidence		.	.	.														.	.																								.
Template Conservation		.	.	.														.	.																								.
Template Sequence		.	.	.	N	F	T	F	P	R	L	P	G	K	W	P	F	.	.	S	L	S	E	Q	Q	L	D	A	R	R	R	G	L	E	E	Y	L	E	K	V	C	S	.	I	R	V	I	G	E	S	D	I	M	Q	E	F	L	S
Template Known Secondary structure		.	.	.	T	S										S	S	.	.																						T	T	.	S					T	S							T	S
Template Predicted Secondary structure		.	.	.														.	.																								.
Template SS confidence
					222	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D