Job Description A2AAY5 Confidence 31.92% Date Tue Jul 30 13:00:07 BST 2013 Rank 370 Aligned Residues 88 % Identity 16% Template c3zeyX_ PDB info PDB header:ribosome Chain: X: PDB Molecule:40s ribosomal protein s3, putative; PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome Resolution 5.57 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	K	V	L	D	V	Q	K	R	R	V	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K	D	P
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		D	D	G	F	A	G	V	E	H	R	V	T	P	T	R	T	E	I	V	I	.	.	.	.	R	S	T	K	T	R	E	V	L	G	E	K	G	R	R	I	R	E	L	T	A	C	L	Q	Q	R	F	N	Y	K	E	G	K	L	Q	L
Template Known Secondary structure		G	G	T										T	T							.	.	.	.			T	T							S	T	T	T	T													T			S	S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
												69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	E	R	V	E	V	R	G	L	S	A	M	A	Q	A	E	S	L	R	F	K	L	L	S	N	L	Q	V	R	R	A	A	M	G	I	I	R	Y	V	M	E
Template Known Secondary structure								S	G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D