Job Description A2AAY5 Confidence 21.07% Date Tue Jul 30 13:00:07 BST 2013 Rank 438 Aligned Residues 85 % Identity 14% Template c3u5cH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:40s ribosomal protein s7-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome a Resolution 3.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		E	V	K	V	L	D	V	Q	K	R	R	V	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	.	.	.	.	Q	M	L	D	K	F	P	M	E	G	G
Query Conservation																																															.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		P	L	Q	F	K	S	I	R	E	I	D	V	A	G	G	K	K	A	L	A	I	F	V	P	.	.	.	.	.	.	.	.	.	V	P	S	L	A	G	F	H	K	V	Q	T	K	L	T	R	E	L	E	K	K	F	Q	D	R	H	V
Template Known Secondary structure		S				S								T	T	S										.	.	.	.	.	.	.	.	.	S	S	S								T										T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		65	.	.	.	.	70	.	.	.	.	.		.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure													.			.
Query SS confidence													.			.
Query Sequence		Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	.	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C
Query Conservation													.			.
Alig confidence													.			.
Template Conservation
Template Sequence		I	F	L	A	E	R	R	I	L	P	K	P	S	R	T	S	R	Q	V	Q	K	R	P	R	S	R	T	L	T	A	V	H	D	K	I	L	E	D	L	V
Template Known Secondary structure															S	S	S				S				G	G	G	S													S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D