Job Description A2AAY5 Confidence 93.79% Date Tue Jul 30 13:00:07 BST 2013 Rank 299 Aligned Residues 78 % Identity 9% Template c3odwB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:rho guanine nucleotide exchange factor 1; PDBTitle: crystal structure of the linker-dh/ph domains of p115-rhogef Resolution 3.20 Å

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		46	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																			.
Query SS confidence														.	.	.	.	.																			.
Query Sequence		S	K	F	F	D	L	Q	M	Q	M	L	D	.	.	.	.	.	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D
Query Conservation														.	.	.	.	.																			.
Alig confidence														.	.	.	.	.																			.
Template Conservation
Template Sequence		P	R	F	C	A	F	V	Q	E	A	E	S	R	P	R	C	R	R	L	Q	L	K	D	M	I	P	T	E	M	Q	R	L	T	K	Y	P	L	L	L	Q	S	I	G	Q	N	T	E	E	P	T	E	R	E	K	V	E	L	A	A	E
Template Known Secondary structure													T	S	G	G	G	T	T							T	T																		T	T			S
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	C	R	E	I	L	H	H	V	N	Q	A	V	R	D	M	E	D	L	L	R	L	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D