Job Description A2AAY5 Confidence 96.34% Date Tue Jul 30 13:00:07 BST 2013 Rank 271 Aligned Residues 152 % Identity 7% Template c3mpxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5 Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.
Predicted Secondary structure																																			.															.	.	.	.	.	.	.
Query SS confidence																																			.															.	.	.	.	.	.	.
Query Sequence		R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	.	.	.	.	.	.	.	V	A	V	K	R
Query Conservation																																			.															.	.	.	.	.	.	.
Alig confidence																.																			.															.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		L	H	S	P	R	L	A	A	A	V	R	E	F	E	.	Q	S	T	A	K	H	R	L	L	R	V	V	Q	R	L	F	Q	Y	Q	V	L	L	T	D	Y	L	N	N	L	C	P	D	S	A	E	Y	D	N	T	Q	G	A	L	S	L
Template Known Secondary structure		T	T													.	T																										T	T	S		T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		1009	1010	.	.	.	.	.	.	.	.	.	1020	.	.		.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	.	.	.	.	.	F	E	T	R	P	E	D	L	N	P	P	K	E	E	H	I	G	K	K	K	S	G	N	D	P	T	S	V
Query Conservation																													.	.	.	.	.
Alig confidence															.	.	.												.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		I	S	K	V	T	D	R	A	N	D	S	X	E	.	.	.	Q	G	E	N	L	Q	K	L	V	H	I	E	H	S	V	R	G	Q	G	D	L	L	Q	P	G	R	E	F	L	K	E	G	T	L	X	K	V	T	G	K	N	R	R	P
Template Known Secondary structure														T	.	.	.	T																T							T	T														T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		1074	.	.	.	.	.	1080	.	.	.	.	.	.				.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	M	V	L	E	Q	Y	V	V	V	A	D	Y	Q	K	Q	E	S	S	E	I	S	L	S	V	G	Q	V	V	D	I	I	E	K	N	E	S	G	W	W	F	V	S	T	A	E	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	L	F	L	X	N	D	V	L	L	Y	T	Y	P	Q	K	D	G	K	Y	R	L	K	N	T	L	A	V	S	R	P	V	X	E	K	V	P	Y	A	L	K	I	E	T	S	E	S	C
Template Known Secondary structure								S	S									T	T	S																T	T	S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		1131	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D