Job Description A2AAY5 Confidence 97.35% Date Tue Jul 30 13:00:07 BST 2013 Rank 256 Aligned Residues 154 % Identity 13% Template c3ky9B_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: autoinhibited vav1 Resolution 2.73 Å

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		47	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure														.																		.
Query SS confidence														.																		.
Query Sequence		K	F	F	D	L	Q	M	Q	M	L	D	K	.	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A
Query Conservation														.																		.
Alig confidence														.																		.
Template Conservation
Template Sequence		K	L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	E	A	M	E	K	E	N	L	R	L	A	L	D	A	M	R	D	L
Template Known Secondary structure		T	T	T								T	T	S																											T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																				.	.	.	.	.
Query SS confidence																								.	.																				.	.	.	.	.
Query Sequence		L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E	T	R	P	.	.	E	D	L	N	P	P	K	E	E	H	I	G	K	K	K	S	G	N	D	.	.	.	.	.	P	T	S	V	D	P	M	V	L	E	Q	Y
Query Conservation																								.	.																				.	.	.	.	.
Alig confidence																								.	.																				.	.	.	.	.
Template Conservation
Template Sequence		A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	N	L	D	Q	S	L	A	H	Y	G	R	P	K	I	D	G	E	L	K	I	T	S	V	E	R	M	D	R	Y	A	F	L	L	D	K
Template Known Secondary structure																											T			S		G	G	G	G														S											T	T
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure												.	.	.	.																						.	.	.	.	.	.
Query SS confidence												.	.	.	.																						.	.	.	.	.	.
Query Sequence		V	V	V	A	D	Y	Q	K	Q	E	.	.	.	.	S	S	E	I	S	L	S	V	G	Q	V	V	D	I	I	E	K	N	E	S	G	.	.	.	.	.	.	W	W	F	V	S	T	A	E	E	Q	G	W
Query Conservation												.	.	.	.																						.	.	.	.	.	.
Alig confidence												.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	I	C	K	R	R	G	D	S	Y	D	L	K	D	F	V	N	L	H	S	F	Q	V	R	D	D	S	S	G	D	R	D	N	K	K	W	S	H	M	F	L	L	I	E	D	Q	G	A	Q	G	Y
Template Known Secondary structure										T	T										G	G	G								S	S	T	T	T	T		T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D