Job Description A2AAY5 Confidence 99.22% Date Tue Jul 30 13:00:07 BST 2013 Rank 221 Aligned Residues 113 % Identity 20% Template c3iq2B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-7; PDBTitle: human sorting nexin 7, phox homology (px) domain Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																						.												.	.	.	.
Query SS confidence																						.												.	.	.	.
Query Sequence		P	P	R	R	S	I	V	E	V	K	V	L	D	V	Q	K	R	R	V	P	.	N	K	H	Y	V	Y	I	I	R	V	T	.	.	.	.	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L
Query Conservation																						.												.	.	.	.
Alig confidence																						.												.	.	.	.
Template Conservation
Template Sequence		E	P	D	L	K	D	L	F	I	T	V	D	E	P	E	S	H	V	T	T	I	E	T	F	I	T	Y	R	I	I	T	K	T	S	R	G	E	F	D	S	S	E	F	E	V	R	R	R	Y	Q	D	F	L	W	L	K	G	K	L	E
Template Known Secondary structure																					S	S												S		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																		.																								.
Template Conservation						.	.	.	.	.	.	.	.	.																		.																								.
Template Sequence		E	A	H	P	.	.	.	.	.	.	.	.	.	T	L	I	I	P	P	L	P	E	K	F	M	V	E	R	F	N	.	D	D	F	I	E	T	R	R	K	A	L	H	K	F	L	N	R	I	A	D	H	P	T	.	L	T	F	N	E
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	T	S												G	G	G		.																				T	S	T	T	.	G	G	G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																		.																								.
Template SS confidence
		86	.	.	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.
		117	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	Q	F	F	E	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	K	I	F	L	T	A	Q
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D