Job Description A2AAY5 Confidence 98.43% Date Tue Jul 30 13:00:07 BST 2013 Rank 244 Aligned Residues 114 % Identity 19% Template c3hpbA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:snx5 protein; PDBTitle: crystal structure of snx5-px domain in p212121 space group Resolution 2.19 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	E	V	K	V	L	D	V	Q	K	R	R	V	P	N	K	H	Y	V	Y	I	.	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K
Query Conservation																							.
Alig confidence																							.																																		.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	Q	I	D	I	P	D	A	L	S	E	R	D	K	V	K	F	T	V	H	T	K	T	T	L	P	T	F	Q	S	P	E	F	S	V	T	R	Q	H	E	D	F	V	W	L	H	D	T	L	T	E	T	T	D	Y	.	.	.	.	.
Template Known Secondary structure													T	T													T	T	S	S		S																				T		G	G	G	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																													.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	A	V	K	R	L	I	P	I
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	G	L	I	I	P	P	A	P	T	K	P	D	F	D	G	P	R	E	K	X	Q	K	L	G	E	G	E	G	S	X	T	K	E	E	F	A	K	X	K	Q	E	L	E	A	E	Y	L	A	V	F	K	K	T	V	S	S	H
Template Known Secondary structure		.	.	T	T	S																								T	G	G	G	S
Template Predicted Secondary structure		.	.
Template SS confidence
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E	T	R	P	E	D	L	N
Query Conservation
Alig confidence														.													.
Template Conservation														.													.
Template Sequence		E	V	F	L	Q	R	L	S	S	H	P	V	.	L	S	K	D	R	N	F	H	V	F	L	E	.	Y	D	Q	D	L	S
Template Known Secondary structure												T	T	.	G	G	G										.			S		T	T
Template Predicted Secondary structure														.													.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D