Job Description A2AAY5 Confidence 98.69% Date Tue Jul 30 13:00:07 BST 2013 Rank 241 Aligned Residues 111 % Identity 23% Template c3dyuB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sorting nexin-9; PDBTitle: crystal structure of snx9px-bar (230-595), h32 Resolution 4.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		P	P	R	R	S	I	V	E	V	K	V	L	D	V	Q	K	R	R	V	P	.	.	.	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K
Query Conservation																						.	.	.
Alig confidence																						.	.	.															.	.	.
Template Conservation																																							.	.	.
Template Sequence		V	Y	P	T	S	T	F	D	C	V	V	A	D	P	R	K	G	S	K	M	Y	G	L	K	S	Y	I	E	Y	Q	L	T	P	T	N	T	N	.	.	.	R	S	V	N	H	R	Y	K	H	F	D	W	L	Y	E	R	L	L	V	K
Template Known Secondary structure					S	S															S	S	S	S											S	S	S		.	.	.
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V
Query Conservation
Alig confidence				.	.				.	.	.	.	.	.															.																									.
Template Conservation				.	.				.	.	.	.	.	.															.																									.
Template Sequence		F	G	.	.	S	A	I	.	.	.	.	.	.	P	I	P	S	L	P	D	K	Q	V	T	G	R	F	.	E	E	E	F	I	K	M	R	M	E	R	L	Q	A	W	M	T	R	M	C	R	H	P	V	.	I	S	E	S	E	V	F
Template Known Secondary structure			T	.	.	T	T	S	.	.	.	.	.	.										S	S		T	T	.	S																				T		T	T	.	T	T	T	S
Template Predicted Secondary structure				.	.				.	.	.	.	.	.															.																									.
Template SS confidence
		301	.			.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350
		119	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	F	F	E	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	F	L	N	F	R
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D