Job Description A2AAY5 Confidence 96.60% Date Tue Jul 30 13:00:07 BST 2013 Rank 265 Aligned Residues 129 % Identity 10% Template c3bjiA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: structural basis of promiscuous guanine nucleotide exchange2 by the t-cell essential vav1 Resolution 2.60 Å

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		46	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.
Predicted Secondary structure														.	.	.	.	.																			.											.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																			.											.	.	.	.	.	.
Query Sequence		S	K	F	F	D	L	Q	M	Q	M	L	D	.	.	.	.	.	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	.	.	.	.	.	.	H	I	R	D	V	A	V	K
Query Conservation														.	.	.	.	.																			.											.	.	.	.	.	.
Alig confidence														.	.	.	.	.																			.											.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	V	Q	M	K	L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	E	A	M	E	K	E	N	L	R	L	A	L	D
Template Known Secondary structure																	T	T	S	S							T							T	T										T	T				S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E	T	R	P	E	D	L	N	P	.	.	.	.	P	K	E	E	H	I	G	K	K	K	S	G	N	D	P	T	S	V
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.
Template Conservation
Template Sequence		A	M	R	D	L	A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	N	L	D	Q	S	L	A	H	Y	G	R	P	K	I	D	G	E	L	K	I	T	S	V	E	R	R	S	K	M	D
Template Known Secondary structure																													S			S			S		G	G	G	G														S	S			S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	M	V	L	E	Q	Y	V	V	V	A	D	Y	Q	K	Q	E	S	S	E	I	S	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	A	F	L	L	D	K	A	L	L	I	C	K	R	R	G	D	S	Y	D	L	K	D	F
Template Known Secondary structure								S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D