Job Description A2AAY5 Confidence 47.40% Date Tue Jul 30 13:00:07 BST 2013 Rank 322 Aligned Residues 83 % Identity 18% Template c2zzqA_ PDB info PDB header:virus Chain: A: PDB Molecule:protein orf3, capsid protein; PDBTitle: crystal structure analysis of the hev capsid protein, porf2 Resolution 3.81 Å

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		187	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																																															.
Query SS confidence									.	.	.	.	.	.																																															.
Query Sequence		S	G	W	W	F	V	S	.	.	.	.	.	.	T	A	E	E	Q	G	W	V	P	A	T	C	L	E	G	Q	D	G	V	Q	D	E	F	S	L	Q	P	E	E	E	E	K	Y	T	V	I	Y	P	Y	T	A	R	D	Q	D	E	.
Query Conservation									.	.	.	.	.	.																																															.
Alig confidence									.	.	.	.	.	.																																															.
Template Conservation
Template Sequence		G	G	Q	L	F	Y	S	R	P	V	V	S	A	N	G	E	P	T	V	K	L	Y	T	S	V	E	N	A	Q	Q	D	K	G	I	A	I	P	H	D	I	D	L	G	E	S	R	V	V	I	Q	D	Y	D	N	Q	H	E	Q	D	R
Template Known Secondary structure		T	T	T										S	S	S	S							S	S						T	T				B		S	S														S	S			B	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	N	L	E	R	G	A	V	V	E	V	V	Q	K	N	L	E	G	W	W	K	I	R	Y	Q	G	K	E	G	W	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																														.
Template Sequence		P	T	P	S	P	A	P	S	R	P	F	S	V	L	R	A	N	D	V	L	W	L	S	L	T	A	A	E	.	Y	D	Q	S	T	Y	G	S	S	T	G	P	V
Template Known Secondary structure					S	S	S					S	S		B		T	T									S			.				T	T		S	S	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D