Return to main results Retrieve Phyre Job Id

Job DescriptionA2AAY5
Confidence99.67%DateTue Jul 30 13:00:07 BST 2013
Rank19Aligned Residues115
% Identity16%Templatec2rqrA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
ResolutionUNK
Model Dimensions (Å)X:52.588 Y:52.258 Z:44.534

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   791........800.........810.........820.........830.........840.........850
Predicted Secondary structure 


























































Query SS confidence 



























































Query Sequence  PAAGRALLVPPKAKPFLSNSSVGQDDMRGKGGLGPRVTGKVGETREKAASFLNADGPKDS
Query Conservation           
                                                  
Alig confidence 



























































Template Conservation 

 

            
  

      
                               
Template Sequence  GSSGSSGRLLDLENIQIPDAPPPIPKEPSNYDFSGPSSGIEGRGSSGSSGSSGSSGDKER
Template Known Secondary structure 









SS





SS







SS



SS


TTTT








S
S



Template Predicted Secondary structure 


























































Template SS confidence 



























































   1........10.........20.........30.........40.........50.........60
 
   851........860... ......870.........880.........890.........900.......
Predicted Secondary structure 





.





















Query SS confidence 












.











































Query Sequence  LYVAVANFEGDED. TSSFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYLRKK
Query Conservation   
   
 
    
.

 
 




 
  
 




 
 
      
 








  
Alig confidence 












.




























..












Template Conservation     




 
    



  

 
 
 
     
        
..  
 

 


   
Template Sequence  HGVAIYNFQGSGAPQLSLQIGDVVRIQETCGDWYRGYLIKHKM. . LQGIFPKSFIHIK
Template Known Secondary structure  B
S
B


STTB

B
TT
TTSS
TT..
GGGB


Template Predicted Secondary structure 




















..


Template SS confidence 

























































   61........70.........80.........90.........100... ......110......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D