Job Description A2AAY5 Confidence 96.53% Date Tue Jul 30 13:00:07 BST 2013 Rank 268 Aligned Residues 145 % Identity 15% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.
Predicted Secondary structure																																.															.	.	.	.	.	.	.
Query SS confidence																																.															.	.	.	.	.	.	.
Query Sequence		S	K	F	F	D	L	Q	M	Q	M	L	D	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	.	.	.	.	.	.	.	V	A	V	K	R	L	I	P
Query Conservation																																.															.	.	.	.	.	.	.
Alig confidence																																.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L	L	L	K	D	F	L	K	Y	Y	N	R	A	G	M	D	T	A	D	L	E	Q	A	V	E	V	M	C	F
Template Known Secondary structure														S	S						T	T							T	S												T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	Q	F	F	E	T	R	P	E	D	L	N	P	P	K	E	E	H	I	G	K	K	K	S	G	N	D	P	T	S	V	D	P	M	V	L	E	Q	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		V	P	K	R	C	N	D	M	M	T	L	G	R	L	R	G	F	E	G	K	L	T	A	Q	G	K	.	.	.	.	.	.	.	.	.	L	L	G	Q	D	T	F	W	V	T	E	P	S	R	G	R	E	R	R	V	F	L	F	E	Q
Template Known Secondary structure												G	G	G		B	S			S		S	T	T	S			.	.	.	.	.	.	.	.	.																								S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.										.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		V	V	V	A	D	Y	Q	K	Q	E	.	.	.	.	S	S	E	I	S	L	S	V	G	Q	V	V	D	I	I	E	K	N	E	S	G	W	W	F	V	S	T	A	E	E	Q	G
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		I	I	I	F	S	E	A	L	G	P	G	Y	V	Y	K	N	S	I	K	V	S	C	L	G	L	E	G	N	L	Q	G	D	P	C	R	F	A	L	T	S	R	G	P	E	G	G
Template Known Secondary structure																					G	G	G						S	G	G	G		T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D