Job Description A2AAY5 Confidence 98.45% Date Tue Jul 30 13:00:07 BST 2013 Rank 243 Aligned Residues 112 % Identity 25% Template c2rajA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:sorting nexin-9; PDBTitle: so4 bound px-bar membrane remodeling unit of sorting nexin 9 Resolution 2.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		P	R	R	S	I	V	E	V	K	V	L	D	V	Q	K	R	.	.	.	R	V	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F
Query Conservation																		.	.	.
Alig confidence																		.	.	.																		.	.	.
Template Conservation																																						.	.	.
Template Sequence		Y	P	T	S	T	F	D	C	V	V	A	D	P	R	K	G	S	K	M	Y	G	L	K	S	Y	I	E	Y	Q	L	T	P	T	N	T	N	.	.	.	R	S	V	N	H	R	Y	K	H	F	D	W	L	Y	E	R	L	L	V	K	F
Template Known Secondary structure				S	S														S	S			S											T	T	T		.	.	.
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	M	E	G	G	Q	K	D	P	K	Q	R	I	.	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V
Query Conservation															.
Alig confidence					.	.	.	.	.	.	.	.	.		.															.																								.
Template Conservation					.	.	.	.	.	.	.	.	.																	.																								.
Template Sequence		G	S	A	.	.	.	.	.	.	.	.	.	I	P	I	P	S	L	P	D	K	Q	V	T	G	R	F	E	.	E	E	F	I	K	M	R	M	E	R	L	Q	A	W	M	T	R	M	C	R	H	P	V	.	I	S	E	S	E	V	F
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.	.	.	S											T	T		S	S	.																				T		T	T	.	G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																	.																								.
Template SS confidence
		302	.	.										.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350
		119	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	F	F	E	T	R	P	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	F	L	N	F	R	D	E	K
Template Known Secondary structure						S			S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D