 |
| Job Description | A2AAY5 | | Confidence | 99.53% | Date | Tue Jul 30 13:00:07 BST 2013 |
| Rank | 37 | Aligned Residues | 57 |
| % Identity | 19% | Template | c2ke9A_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:caskin-2; |
PDBTitle: nmr solution structure of the caskin sh3 domain
|
| Resolution | UNK |
|
 |
|   |   |
851 | . | . | . | . | . | . | . | . | 860 | |
|
. | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | |
|
890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . | . |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | Y | V | A | V | A | N | F | E | G | . |
. |
D | E | D | T | S | S | F | Q | E | G | T | V | F | E | V | R | E | K | N | S | S | G | W | W | F | C | Q | V | L | . |
. |
S | G | A | P | S | W | E | G | W | I | P | S | N | Y | L | R | K |
| Query Conservation |   |
  |
|   |   |   |
|   |
|   |   | . | . |   |   |
|
|
|   |
|   |
|
|
|
|
|   |
|   |   |
|   |
|
|
|
|
|   |
|   |
|   | . | . |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
| Template Sequence |   |
K | V | R | A | L | K | D | F | W | N | L | H | D | P | T | A | L | N | V | R | A | G | D | V | I | T | V | L | E | Q | H | P | D | G | R | W | K | G | H | I | H | E | S | Q | R | G | T | D | R | I | G | Y | F | P | P | G | I | V | E | V |
| Template Known Secondary structure |   |
 |  |  |  | S | S |
| B |
|
|
| S |
| T | T | B |
|
| B |
| T | T |
|  |  |  |  | S |
| S | S |
| S | S |
|  |  |  |  |  |
|
| S | S | T | T | S |
|
|
|  |  |  |
| G | G | G |  |  | S |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
|   |
|   |   |
907 |
| Predicted Secondary structure |   |
|
| Query SS confidence |   |
|
| Query Sequence |   |
K |
| Query Conservation |   |
  |
| Alig confidence |   |
|
| Template Conservation |   |
|
| Template Sequence |   |
V |
| Template Known Secondary structure |   |
S |
| Template Predicted Secondary structure |   |
 |
| Template SS confidence |   |
|
|   |   |
345 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|