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Job DescriptionA2AAY5
Confidence99.53%DateTue Jul 30 13:00:07 BST 2013
Rank37Aligned Residues57
% Identity19%Templatec2ke9A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:caskin-2; PDBTitle: nmr solution structure of the caskin sh3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   851........860 .........870.........880......... 890.........900......
Predicted Secondary structure 


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Query Sequence  LYVAVANFEG. . DEDTSSFQEGTVFEVREKNSSGWWFCQVL. . SGAPSWEGWIPSNYLRK
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Template Sequence  KVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEV
Template Known Secondary structure  SS
B


S
TTB

B
TT
S
SS
SS


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   285....290.........300.........310.........320.........330.........340....
 
   907
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  V
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   345
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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