Job Description A2AAY5 Confidence 98.86% Date Tue Jul 30 13:00:07 BST 2013 Rank 238 Aligned Residues 108 % Identity 27% Template c2ettA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-22; PDBTitle: solution structure of human sorting nexin 22 px domain Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		M	P	P	R	R	S	I	V	E	V	K	V	L	D	V	Q	K	R	R	V	P	N	K	.	H	Y	V	Y	I	I	R	V	T	W	S	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F
Query Conservation																									.
Alig confidence																									.										.
Template Conservation																																			.
Template Sequence		L	E	L	E	V	H	I	P	S	V	G	P	E	A	E	G	P	R	Q	S	P	E	K	S	H	M	V	F	R	V	E	V	L	.	C	S	G	R	R	H	T	V	P	R	R	Y	S	E	F	H	A	L	H	K	R	I	K	K	L	Y
Template Known Secondary structure													S						S	S		S	S												.		T	T																					T	T	S
Template Predicted Secondary structure																																			.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.															.	.																									.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.															.	.																									.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	V	P	D	F	P	S	K	R	L	P	N	W	R	T	.	.	R	G	L	E	Q	R	R	Q	G	L	E	A	Y	I	Q	G	I	L	Y	L	N	Q	E	V	.	.	P	K	E	L	L
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.							S	S				S	S	S	.	.	S																				S	S	S	S	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.															.	.																									.	.
Template SS confidence
		67													.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110
		120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	F	E	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	L	R	L	R
Template Known Secondary structure					T		T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D