Return to main results Retrieve Phyre Job Id

Job DescriptionA2AAY5
Confidence99.48%DateTue Jul 30 13:00:07 BST 2013
Rank69Aligned Residues57
% Identity39%Templatec2df6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   846...850.........860... ......870.........880.........890.........900....
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Query Sequence  GPKDSLYVAVANFEGDED. TSSFQEGTVFEVREKNSSGWWFCQVLSGAPSWEGWIPSNYL
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Template Sequence  GPLGSVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTH. . NG. . RTGWFPSNYV
Template Known Secondary structure 

TT
SS
B

SSTTB

B
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SSS..TT..GGG
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   5....10.........20.........30.........40........ .50 .........60
 
   905.
Predicted Secondary structure 
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Query Sequence  RK
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Template Sequence  RE
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Template Predicted Secondary structure 
Template SS confidence 

   61.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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