Job Description A2AAY5 Confidence 99.30% Date Tue Jul 30 13:00:07 BST 2013 Rank 202 Aligned Residues 121 % Identity 15% Template c2cskA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin 12; PDBTitle: solution structure of px domain from human snx12 Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.															.	.	.	.
Query SS confidence																		.															.	.	.	.
Query Sequence		R	S	I	V	E	V	K	V	L	D	V	Q	K	R	R	V	.	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	.	.	.	.	S	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	K	F
Query Conservation																		.															.	.	.	.
Alig confidence																		.															.	.	.	.
Template Conservation
Template Sequence		S	N	F	L	E	I	D	I	F	N	P	Q	T	V	G	V	G	R	A	R	F	T	T	Y	E	V	R	M	R	T	N	L	P	I	F	K	L	K	E	S	C	V	R	R	R	Y	S	D	F	E	W	L	K	N	E	L	E	R	D	S
Template Known Secondary structure		S														S	S	S	S	S														S	S	S	S		S																			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L
Query Conservation
Alig confidence						.																							.																						.
Template Conservation						.																							.																						.
Template Sequence		K	I	V	V	.	P	P	L	P	G	K	A	L	K	R	Q	L	P	F	R	G	D	E	G	I	F	E	.	E	S	F	I	E	E	R	R	Q	G	L	E	Q	F	I	N	K	I	A	G	H	.	P	L	A	Q	N	E	R	C	L	H
Template Known Secondary structure		S				.				S							S	S	T	T				S	S				.																						.
Template Predicted Secondary structure						.																							.																						.
Template SS confidence
		68	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.
		120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	F	E	T	R	P	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	L	Q	E	E	A	I	D
Template Known Secondary structure				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D