Job Description A2AAY5 Confidence 96.66% Date Tue Jul 30 13:00:07 BST 2013 Rank 264 Aligned Residues 139 % Identity 14% Template c1xcgA_ PDB info PDB header:signaling protein activator/signaling pr Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 11; PDBTitle: crystal structure of human rhoa in complex with dh/ph2 fragment of pdzrhogef Resolution 2.50 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.								.	.
Predicted Secondary structure																	.	.	.	.	.																			.													.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																			.													.	.	.	.	.	.	.
Query Sequence		R	R	Y	S	K	F	F	D	L	Q	M	Q	M	L	D	.	.	.	.	.	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	.	.	.	.	.	.	.	R	D
Query Conservation																	.	.	.	.	.																			.													.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																			.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	E	S	R	F	Q	L	F	M	Q	E	A	E	S	H	P	Q	C	R	R	L	Q	L	R	D	L	I	I	S	E	M	Q	R	L	T	K	Y	P	L	L	L	E	S	I	I	K	H	T	E	G	G	T	S	E	H	E	K	L	C
Template Known Secondary structure																T	S	G	G	G	T	T							T	T																			T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		848	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S	Q	C	D	E	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	F	E	T	R	P	E	D	L	N	P	P	K
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	R	D	Q	C	R	E	I	L	K	Y	V	N	E	A	V	K	Q	T	E	N	R	H	R	L	E	G	Y	Q	K	R	L	D	A	T	A	L	E	R	A	S	N	P	L	A	A	E	F	K	S	L	D	L	T	T	R	K	M	I
Template Known Secondary structure																																									S		S		T	T	T	G	G	G	G	G			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		908	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	H	I	G	K	K	K	S	G	N	D	P	T	S	V	D	P	M	V	L	E	Q	Y	V	V	V	A	D	Y	Q	K	Q	E	S	S	E	I	S	L	S	V	G	Q	V	V	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	G	P	L	T	W	R	I	S	K	D	K	T	L	D	L	H	V	L	L	L	E	D	L	L	V	L	L	Q	K	Q	D	E	K	L	L	L	K	C	T	F	S	P	V	L	K	L
Template Known Secondary structure											S	S	S											S	S									S	S										S				G
Template Predicted Secondary structure
Template SS confidence
		968	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D