Job Description A2AAY5 Confidence 98.88% Date Tue Jul 30 13:00:07 BST 2013 Rank 235 Aligned Residues 114 % Identity 21% Template c1ocuA_ PDB info PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte. Resolution 2.3 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																		.	.	.	.	.																		.	.	.	.
Query SS confidence																		.	.	.	.	.																		.	.	.	.
Query Sequence		P	R	R	S	I	V	E	V	K	V	L	D	V	Q	K	R	.	.	.	.	.	R	V	P	N	K	H	Y	V	Y	I	I	R	V	T	W	S	S	.	.	.	.	G	A	T	E	A	I	Y	R	R	Y	S	K	F	F	D	L	Q	M
Query Conservation																		.	.	.	.	.																		.	.	.	.
Alig confidence																		.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		E	P	E	N	F	L	E	I	E	V	H	N	P	K	T	H	I	P	N	G	M	D	S	K	G	M	F	T	D	Y	E	I	I	C	R	T	N	L	P	S	F	H	K	R	V	S	K	V	R	R	R	Y	S	D	F	E	F	F	R	K
Template Known Secondary structure			S	S															T	T	S	S	S	S	T	T														T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	L	D	K	F	P	M	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	I	P	I	D	E	Y	C	K	A	L	I	Q	L	P	P	Y	I	S
Query Conservation
Alig confidence									.	.	.	.	.																																														.
Template Conservation									.	.	.	.	.																																														.
Template Sequence		L	I	K	E	I	S	M	.	.	.	.	.	L	N	H	P	K	V	M	V	P	H	L	P	G	K	I	L	L	S	N	R	F	S	N	E	V	I	E	E	R	R	Q	G	L	N	T	W	M	Q	S	V	A	G	H	P	L	.	L	Q
Template Known Secondary structure									.	.	.	.	.	T	T		T	T							S					T	T	G	G	G	S																				T				.
Template Predicted Secondary structure									.	.	.	.	.																																														.
Template SS confidence
		92	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.
		114	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	D	E	V	L	Q	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	S	K	V	L	V	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D