Job Description A2AAY5 Confidence 99.88% Date Tue Jul 30 13:00:07 BST 2013 Rank 11 Aligned Residues 200 % Identity 12% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK Model Dimensions (Å) X:117.538 Y:205.782 Z:107.286

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		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	G	R	Q	D	G	L	S	P	K	E	T	P	C	R	A	P	P	R	P	A	K	T	T	D	P	G	P	K	N	V	P	V	P	V	Q	E	A	T	L	Q	Q	R	P	V	V	P	P	R	R	P	P	P	P	K	K	T	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L
Template Known Secondary structure																																			S										S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		769	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	S	C	R	P	L	P	E	V	R	G	A	Q	R	E	E	S	R	V	A	P	A	A	G	R	A	L	L	V	P	P	K	A	K	P	F	L	S	N	S	S	V	G	Q	D	D	M	R	G	K	G	G	L	G	P	R	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T
Template Known Secondary structure																											S	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		829	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.		.	.	.	.	.	.	870	.	.	.	.	.	.						.	.	.	880	.	.
Predicted Secondary structure																																					.														.	.	.	.	.
Query SS confidence																																					.														.	.	.	.	.
Query Sequence		G	K	V	G	E	T	R	E	K	A	A	S	F	L	N	A	D	G	P	K	D	S	L	Y	V	A	V	A	N	F	E	G	D	E	D	.	T	S	S	F	Q	E	G	T	V	F	E	V	R	.	.	.	.	.	E	K	N	S	S	G
Query Conservation																																					.														.	.	.	.	.
Alig confidence																																					.														.	.	.	.	.
Template Conservation
Template Sequence		V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G
Template Known Secondary structure															S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		883	.	.	.	.	.	.	890							.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		W	W	F	C	Q	V	L	S	.	.	.	.	.	.	G	A	P	S	W	E	G	W	I	P	S	N	Y	L	R	K	K	P
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure													T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D