Job Description A2AAY5 Confidence 95.15% Date Tue Jul 30 13:00:07 BST 2013 Rank 284 Aligned Residues 102 % Identity 21% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		175	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.
Predicted Secondary structure												.	.	.															.																						.	.	.	.	.	.	.	.
Query SS confidence												.	.	.															.																						.	.	.	.	.	.	.	.
Query Sequence		V	G	Q	V	V	D	I	I	E	K	.	.	.	N	E	S	G	W	W	F	V	S	T	A	E	E	Q	.	G	W	V	P	A	T	C	L	E	G	Q	D	G	V	Q	D	E	F	S	L	Q	.	.	.	.	.	.	.	.	P	E	E
Query Conservation												.	.	.															.																						.	.	.	.	.	.	.	.
Alig confidence												.	.	.															.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	T	R	Y	V	S	A	N	K	A	G
Template Known Secondary structure			S	S											S	S									T	T								T	T	T							G	G	G												T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.											.
Query SS confidence																																	.	.	.											.
Query Sequence		E	E	K	Y	T	V	I	Y	P	Y	T	A	R	D	Q	D	E	M	N	L	E	R	G	A	V	V	E	V	V	Q	K	.	.	.	N	L	E	G	W	W	K	I	R	Y	.	Q	G	K	E	G	W	A	P	A	S	Y	L	K
Query Conservation																																	.	.	.											.
Alig confidence																																	.	.	.											.
Template Conservation
Template Sequence		E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure		S				S	S	S	S			G	G	G					G	G	G	S	T	T												T	T									S	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D