Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 15 Aligned Residues 289 % Identity 18% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å Model Dimensions (Å) X:61.939 Y:79.459 Z:44.454

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		N	D	I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I	P	D	L	V	K	V	H	R	S
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		M	D	K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	K	D	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N
Template Known Secondary structure			S																																	T	T	T		S									S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	Q	E	I	H	D	S	I	V	N	K	D	D	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	S	N	L	D	Y	I	S	K	T	K	E	D	V	K	L	K	L	E
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		F	L	K	E	I	E	Q	R	L	A	L	W	.	.	.	.	E	G	D	V	M	L	K	N	I	Q	G	M	K	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L	E	N	F	C	R
Template Known Secondary structure														.	.	.	.												G	G	G	S					T	T											T	T	T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.					610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	H	.	D	P	M	E	K	A	N	L	K	L	A	L	D	A	M	K	D	L	A	Q
Query Conservation																																									.
Alig confidence										.																															.						.	.	.	.	.	.
Template Conservation										.																																					.	.	.	.	.	.
Template Sequence		D	F	E	L	Q	K	V	C	.	Y	L	P	L	N	T	F	L	L	R	P	L	H	R	L	M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	D	C	R	A	A	.	.	.	.	.	.	L	A	E	I	T	E	M	V	A
Template Known Secondary structure					T	S	S	S		.		S		G	G	G	G	G	T																												.	.	.	.	.	.
Template Predicted Secondary structure										.																																					.	.	.	.	.	.
Template SS confidence
		667	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710							.	.	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D	K	H	T	K	Q	E	R	H	I	F	L	F	D
Query Conservation
Alig confidence																											.																				.	.
Template Conservation																											.																				.	.
Template Sequence		Q	L	H	G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D	L	I	G	I	.	D	L	V	V	P	G	R	E	F	I	R	L	G	S	L	S	K	L	S	.	.	G	K	G	L	Q	Q	R	M	F	F	L	F	N
Template Known Secondary structure			T	T	T													T	G	G	G	T			S		.					T	T														.	.	S	S	S										S
Template Predicted Secondary structure																											.																				.	.
Template SS confidence
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750		.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.			770	.	.	.	.	.	.	.	.	.	780	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	I	V	C	K	R	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D	K	E	N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T
Query Conservation
Alig confidence									.																					.	.	.	.	.	.	.	.											.	.
Template Conservation									.																					.	.	.	.	.	.	.	.											.	.
Template Sequence		D	V	L	L	Y	T	S	.	R	S	N	Q	F	K	V	H	G	Q	L	P	L	Y	G	M	T	I	E	E	.	.	.	.	.	.	.	.	S	E	D	P	H	C	L	T	L	R	.	.	G	Q	R	Q	S	I	I	V	A	A	S	S
Template Known Secondary structure		S							.				S										S	S						.	.	.	.	.	.	.	.											.	.		S	S								S	S
Template Predicted Secondary structure									.																					.	.	.	.	.	.	.	.											.	.
Template SS confidence
		784	.	.	.	.	.	790		.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810									.	.	.	.	.	.	.	.	.	820			.	.	.	.	.	.	.	.	.	830	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	E	M	E	K	W	V	E	D	I	Q	M	A	I	D	L
Template Known Secondary structure		S	T	T														S
Template Predicted Secondary structure
Template SS confidence
		841	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D