Return to main results Retrieve Phyre Job Id

Job DescriptionQ9R0C8
Confidence99.32%DateWed Jul 10 14:10:18 BST 2013
Rank269Aligned Residues102
% Identity18%Templatec3qwmA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:iq motif and sec7 domain-containing protein 1; PDBTitle: crystal structure of gep100, the plextrin homology domain of iq motif2 and sec7 domain-containing protein 1 isoform a
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410. ........420.........430... ......440.........450.
Predicted Secondary structure 



....







..


Query SS confidence 













. . . .





















. .

















Query Sequence  FGRPQGDGEIRITT. . . . LDKHTKQERHIFLFDLAVIVCK. . RKGDNYEMKEIIDLQQYK
Query Conservation     
   
      ....        
  


   

  
..        
    
    
Alig confidence 













....





















..

















Template Conservation   
 
        
 
  
  

    
  




 

  
       
  
    
    
Template Sequence  HRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQNSVTYSFRQSFSLYGMQ
Template Known Secondary structure 



S
TTS


TTTTSS












TT
Template Predicted Secondary structure 

























Template SS confidence 



























































   736...740.........750.........760.........770.........780.........790.....
 
   452.......460.........470.... .....480.........490.........500....
Predicted Secondary structure 












....




Query SS confidence 






















. . . .





























Query Sequence  IANNPTTDKENKKWSYGFYLIHT. . . . QGQNGLEFYCKTKDLKKKWLEQFEMALSNI
Query Conservation 
                  
   ....       
       
  
   
  
    
Alig confidence 



.....













....





























Template Conservation 
   .....        
 
              
 
 
 


  

  
  

 
 
Template Sequence  VLLF. . . . . ENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEV
Template Known Secondary structure  .....

SS
TT

TTS


SS
Template Predicted Secondary structure 
.....















Template SS confidence 
























































   799800.. .......810.........820.........830.........840.........850
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D