 |
| Job Description | Q9R0C8 | | Confidence | 99.21% | Date | Wed Jul 10 14:10:18 BST 2013 |
| Rank | 277 | Aligned Residues | 59 |
| % Identity | 15% | Template | c3lh5A_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:tight junction protein zo-1; |
PDBTitle: crystal structure of the sh3-guanylate kinase core domain of zo-1
|
| Resolution | 2.60 Å |
|
 |
|   |   |
788 | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | |
|
. | . | . | . | . | . | . | . | . | 830 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | V | L | G | I | A | I | A | R | Y | D | F | C | A | R | D | M | R | E | L | S | L | L | K | G | D | M | V | K | I | Y | T | K | . |
. |
M | S | A | N | G | W | W | R | G | E | V | . |
. |
. |
. |
. |
. |
N | G | R | V | G | W | F | P |
| Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |
|
|   |   | . | . |   |   |   |
|
|
|
|   |
|
|   | . | . | . | . | . | . |   |
|   |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
| Template Sequence |   |
G | D | S | F | Y | I | R | T | H | F | E | Y | E | K | E | S | P | Y | G | L | S | F | N | K | G | E | V | F | R | V | V | D | T | L | Y | N | G | K | L | G | S | W | L | A | I | R | I | G | K | N | H | K | E | V | E | R | G | I | I | P |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
| S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
| T | T | T | T | T | T | S |  |  |  |  |  |  |  |
| G | G | G |
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
516 | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . |
|   |
|   |   |
840 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
| Query Sequence |   |
S | T | Y | V | E | E | D |
| Query Conservation |   |
|
|
|
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |
|   |
| Template Sequence |   |
N | K | N | R | A | E | Q |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|   |   |
576 | . | . | . | 580 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|