Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 4 Aligned Residues 309 % Identity 20% Template c3ksyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:son of sevenless homolog 1; PDBTitle: crystal structure of the histone domain, dh-ph unit, and2 catalytic unit of the ras activator son of sevenless (sos) Resolution 3.18 Å Model Dimensions (Å) X:59.537 Y:79.342 Z:44.695

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I	P	D	L	V	K	V	H	R	S	L
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		T	Y	Y	D	L	V	K	A	F	M	A	E	I	R	Q	Y	I	R	E	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L
Template Known Secondary structure																											T	T								T	T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																	.	.	.	.											.	.																	.	.
Query SS confidence																	.	.	.	.											.	.																	.	.
Query Sequence		M	Q	E	I	H	D	S	I	V	N	K	D	D	Q	N	.	.	.	.	L	Y	Q	V	F	I	N	Y	K	E	.	.	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	.	.	S	N	L	D	Y	I	S	K	T	K	E
Query Conservation																	.	.	.	.											.	.																	.	.
Alig confidence																	.	.	.	.											.	.																	.	.
Template Conservation
Template Sequence		L	G	H	I	E	D	T	V	E	M	T	D	E	G	S	P	H	P	L	V	G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G
Template Known Secondary structure														S	S	S	S	S													T	T	T	T	S												T	T							T	T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	H	D	P	M	E	K	A	N	L	K	L	A	L	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V	L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y	F	E	L	L	K	Q	L	E	E	K	S	E	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A
Template Known Secondary structure											T	T								T					T	T																			S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		361	.	.	.	.	.										.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		M	K	D	L	A	Q	.	.	.	.	.	.	.	.	.	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	.	.	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I
Query Conservation								.	.	.	.	.	.	.	.	.																												.	.
Alig confidence								.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		L	L	N	V	Q	S	G	M	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	A	I	K	K	M	N	E	I	Q	K	N	I	D	G	W	E	G	K	D	I	G	Q	C	C	N	E	F	I	M	E	G	T	L	T	R
Template Known Secondary structure		T											T	T	S	T	T												S								T	S	S	S			S	S		G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.											.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	L	D	K	H	T	K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	K	G	D	N	.	.	.	.	.	.	.	.	.	.	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.	.																																																						.	.	.
Template Sequence		.	.	.	.	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	M	I	C	C	K	S	N	H	G	Q	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F	M	R	K	V	Q	I	N	D	K	D	.	.	.
Template Known Secondary structure		.	.	.	.	T	T		S	S								T	T									T	T					T	T	S				S										S	S								.	.	.
Template Predicted Secondary structure		.	.	.	.																																																						.	.	.
Template SS confidence
						453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I	R	P	D	Y	A
Query Conservation
Alig confidence		.																			.
Template Conservation		.																			.
Template Sequence		.	D	T	N	E	Y	K	H	A	F	E	I	I	L	K	D	E	N	S	.	V	I	F	S	A	K	S	A	E	E	K	N	N	W	M	A	A	L	I	S	L	Q	Y	R	S	T	L	E	R	M
Template Known Secondary structure		.		S	S	S			S							T	T	S			.						S	S
Template Predicted Secondary structure		.																			.
Template SS confidence
			506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D