Job Description Q9R0C8 Confidence 98.18% Date Wed Jul 10 14:10:18 BST 2013 Rank 356 Aligned Residues 83 % Identity 20% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.		.	.	.	.	.	.	.	720	.	.				.	.
Predicted Secondary structure																																														.											.	.	.
Query SS confidence																																														.											.	.	.
Query Sequence		C	Q	P	W	Y	A	G	P	M	E	R	L	Q	A	E	T	E	L	I	N	R	V	N	S	T	Y	L	V	R	H	R	T	K	E	S	G	E	Y	A	I	S	I	K	Y	.	N	N	E	A	K	H	I	K	I	L	.	.	.	T	R
Query Conservation																																														.											.	.	.
Alig confidence								.																																						.											.	.	.
Template Conservation								.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E
Template Known Secondary structure		T		T	T	B		.												T	T	S		T	T									S	T	T											T	T
Template Predicted Secondary structure								.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	F	F	H	I	A	E	N	R	K	F	K	S	L	M	E	L	V	E	Y	Y	K	H	H	S	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R
Template Known Secondary structure								S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D