Return to main results Retrieve Phyre Job Id

Job DescriptionQ9R0C8
Confidence96.63%DateWed Jul 10 14:10:18 BST 2013
Rank479Aligned Residues100
% Identity11%Templatec3a8qB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: low-resolution crystal structure of the tiam2 phccex domain
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.........430.........440.........450.........460
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  PQGDGEIRITTLDKHTKQERHIFLFDLAVIVCKRKGDNYEMKEIIDLQQYKIANNPTTDK
Query Conservation 
   
              
  


   

  
        
    
    
        
Alig confidence 




































...















....
Template Conservation      

        
 

 

 

    
 


    ...
   
 
    
    ....
Template Sequence  VTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYSA. . . PRCALFAEDSIVQSVP. . . .
Template Known Secondary structure  BTTT






TTS



...
S
TT

T....
Template Predicted Secondary structure 






















...








....
Template SS confidence 



























































   517..520.........530.........540.........550... ......560.........
 
   461........470.........480.........490.........500........
Predicted Secondary structure 











Query SS confidence 















































Query Sequence  ENKKWSYGFYLIHTQGQNGLEFYCKTKDLKKKWLEQFEMALSNIRPDY
Query Conservation            
          
       
  
   
  
     
  
Alig confidence 















.






























Template Conservation     

   
 
 
   .  
 


 
  
   

 

  
 
      
Template Sequence  EHPKKEHVFCLSNSCG. DVYLFQATSQTDLENWVTAIHSACASLFAKK
Template Known Secondary structure  T
SS
SSTTT.
SS
Template Predicted Secondary structure 









.




Template SS confidence 















































   578.580.........590... ......600.........610.........620....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D