Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 17 Aligned Residues 297 % Identity 22% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å Model Dimensions (Å) X:71.663 Y:75.730 Z:42.637

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		Q	P	K	S	Q	E	N	D	I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I	P
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		E	Q	K	K	K	A	L	E	R	S	M	Y	V	L	S	E	L	V	E	T	E	K	M	Y	V	D	D	L	G	Q	I	V	E	G	Y	M	A	T	M	A	A	Q	G	V	P	E	S	L	R	G	R	D	R	I	V	F	G	N	I	Q
Template Known Secondary structure					S																													T	T												S	S	S	G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	K	V	H	R	S	L	M	Q	E	I	H	D	S	I	V	N	K	D	D	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	S	N	L	D	Y	I	S	K	T	K
Query Conservation
Alig confidence																						.																																						.	.
Template Conservation																						.																																						.	.
Template Sequence		Q	I	Y	E	W	H	R	D	Y	F	L	Q	E	L	Q	R	C	L	K	D	.	P	D	W	L	A	Q	L	F	I	K	H	E	R	R	L	H	M	Y	V	V	Y	C	Q	N	K	P	K	S	E	H	V	V	S	E	F	G	D	.	.
Template Known Secondary structure										T										S		.	G	G	G								T	T	T	T	T									T	S								T	T	T	S		.	.
Template Predicted Secondary structure																						.																																						.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		E	D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	H	.	D	P	M	E	K	A	N	L	K	L	A	L
Query Conservation																																																	.
Alig confidence		.	.	.	.	.																																											.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L	L	L	K	D	F	L	K	Y	Y	N	R	A	G	M	D	T	A	D	L	E	Q	A	V
Template Known Secondary structure		.	.	.	.	.													S	S						T	T							T	S												T	S	S	S		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	M	K	D	L	A	Q	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D	K	H	T	K	Q
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		E	V	M	C	F	V	P	K	R	C	N	D	M	M	T	L	G	R	L	.	.	.	.	.	.	.	.	.	.	.	R	G	F	E	G	K	L	T	A	Q	G	K	L	L	G	Q	D	T	F	W	V	T	E	P	S	R	G	R	.	.
Template Known Secondary structure																	G	G	G		.	.	.	.	.	.	.	.	.	.	.	B	S			S		S	T	T	S																			.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.												.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D	K	E	N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	.
Query Conservation																																																													.
Alig confidence																																						.	.	.	.																				.
Template Conservation																																						.	.	.	.
Template Sequence		E	R	R	V	F	L	F	E	Q	I	I	I	F	S	E	A	L	G	P	G	Y	V	Y	K	N	S	I	K	V	S	C	L	G	L	E	G	.	.	.	.	N	L	Q	G	D	P	C	R	F	A	L	T	S	R	G	P	E	G	G	I
Template Known Secondary structure									S	S																				G	G	G						.	.	.	.	S	G	G	G		T	T									S	S	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.					.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	Y	V	L	Q	A	A	D	P	A	I	S	Q	A	W	I	K	H	V	A	Q	I	L	E	S	Q	R
Template Known Secondary structure									S	S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D