Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 5 Aligned Residues 324 % Identity 24% Template c2dx1A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef Resolution 2.36 Å Model Dimensions (Å) X:80.583 Y:62.869 Z:48.569

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	G	E	D	E	G	G	E	V	Y	E	D	L	M	K	A	E	E	A	Q	Q	P	K	S	Q	E	N	D	I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	V	A	D	G	E	G	W	F	P	A	S	F	V	R	L	R	V	N	Q	D	A	Q	S	S	K	D	Q	X	R	T	N	V	I	N	E	I	L	S	T	E	R	D	Y	I	K	H	L	R	D	I	C	E	G	Y	V	R	Q	C
Template Known Secondary structure					S	S							G	G	G					S																																					T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		223	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																																						.	.
Query SS confidence				.	.	.																																						.	.
Query Sequence		K	R	.	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I	P	D	L	V	K	V	H	R	S	L	M	Q	E	I	H	D	S	I	V	N	K	D	D	.	.	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I
Query Conservation				.	.	.																																						.	.
Alig confidence				.	.	.																																						.	.
Template Conservation
Template Sequence		R	K	R	A	D	X	F	S	E	E	Q	L	R	T	I	F	G	N	I	E	D	I	Y	R	C	Q	K	A	F	V	K	A	L	E	Q	R	F	N	R	E	R	P	H	L	S	E	L	G	A	C	F	L	E	H	Q	A	D	F	Q	I
Template Known Secondary structure		T	T		T	T	T											T	T																	T	T			S	S	S	G	G	G										T						T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	Q	Y	C	S	G	V	E	S	A	I	S	N	L	D	Y	I	S	K	T	K	E	D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		Y	S	E	Y	C	N	N	H	P	N	A	C	V	E	L	S	R	L	T	.	K	L	S	K	Y	V	Y	F	F	E	A	C	R	L	L	Q	K	X	I	D	I	S	L	D	G	F	L	L	T	P	V	Q	K	I	C	K	Y	P	L	Q
Template Known Secondary structure																					.	T																T			S
Template Predicted Secondary structure																					.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		338	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.
Predicted Secondary structure											.																																																.	.
Query SS confidence											.																																																.	.
Query Sequence		L	Q	E	L	V	K	H	T	H	.	D	P	M	E	K	A	N	L	K	L	A	L	D	A	M	K	D	L	A	Q	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	.	.	P
Query Conservation											.																																																.	.
Alig confidence											.																																																.	.
Template Conservation
Template Sequence		L	A	E	L	L	K	Y	T	H	P	Q	H	R	D	F	K	D	V	E	A	A	L	H	A	X	K	N	V	A	Q	L	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	S	S	I	E	D	W	E	G	E	D	L
Template Known Secondary structure								T	S		T	T		T	T																																						S	B	S			S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.				.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D	K	H	T	K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	.	.	.	R	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		L	V	R	S	S	E	L	I	Y	S	G	E	L	T	R	V	T	Q	P	Q	A	K	S	Q	Q	R	X	F	F	L	F	D	H	Q	L	I	Y	C	K	K	D	L	L	R	R	D	V	L	Y	Y	K	G	R	L	D	X	D	G	L	E
Template Known Secondary structure																			S	S	S	S											T	T									T	T		T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	N	N	P	T	T	D	K	E	N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		V	V	.	.	.	.	.	.	.	.	.	.	.	I	K	N	A	F	R	L	.	.	.	.	.	.	H	S	H	L	L	C	T	R	K	P	E	Q	K	Q	R	W	L	K	A	F	A	R	E	R	E	Q	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.								S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		483	.												.	.	.	.	.	490	.							.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D