Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 7 Aligned Residues 331 % Identity 23% Template c2dfkA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:collybistin ii; PDBTitle: crystal structure of the cdc42-collybistin ii complex Resolution 2.15 Å Model Dimensions (Å) X:81.291 Y:67.253 Z:59.539

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		A	Q	Q	P	K	S	Q	E	N	D	I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	.	F	L	T	A	A	E	F	D	S	V	F	I	N	I
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		L	G	R	P	L	Q	N	R	D	Q	M	R	A	N	V	I	N	E	I	M	S	T	E	R	H	Y	I	K	H	L	K	D	I	C	E	G	Y	L	K	Q	C	R	K	R	R	D	M	F	S	D	E	Q	L	K	V	I	F	G	N	I
Template Known Secondary structure			S																																			T								T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		P	D	L	V	K	V	H	R	S	L	M	Q	E	I	H	D	S	I	V	N	K	D	D	.	.	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	S	N	L	D	Y	I	S
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		E	D	I	Y	R	F	Q	M	G	F	V	R	D	L	E	K	Q	Y	N	N	D	D	P	H	L	S	E	I	G	P	C	F	L	E	H	Q	D	G	F	W	I	Y	S	E	Y	C	N	N	H	L	D	A	C	M	E	L	S	K	L	M
Template Known Secondary structure																					S	S		G	G	G										T	T	T	G	G	G																				T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		K	T	K	E	D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	H	.	D	P	M	E	K	A	N	L	K
Query Conservation																																																				.
Alig confidence			.																																																	.
Template Conservation			.
Template Sequence		K	.	D	S	R	Y	Q	H	F	F	E	A	C	R	L	L	Q	Q	M	I	D	I	A	I	D	G	F	L	L	T	P	V	Q	K	I	C	K	Y	P	L	Q	L	A	E	L	L	K	Y	T	A	Q	D	H	S	D	Y	R	Y	V	A
Template Known Secondary structure		T	.	S														T	T			S								T																			T	S		T	T	S	T	T
Template Predicted Secondary structure			.
Template SS confidence
		160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	A	L	D	A	M	K	D	L	A	Q	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	.	.	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		A	A	L	A	V	M	R	N	V	T	Q	Q	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	A	S	V	L	D	W	E	G	D	D	I	L	D	R	S	S	E	L	I	Y	T	G	E	M	A	W	I	Y	Q	P
Template Known Secondary structure																							T											S	B	T			S	S		G	G	G	T														S	S	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.				.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.
Predicted Secondary structure																							.	.	.																																.	.
Query SS confidence																							.	.	.																																.	.
Query Sequence		K	H	T	K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	.	.	.	K	G	D	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D	K	E	N	K	K	W	.	.	S	Y	G
Query Conservation																							.	.	.																																.	.
Alig confidence																							.	.	.																																.	.
Template Conservation
Template Sequence		Y	G	R	N	Q	Q	R	V	F	F	L	F	D	H	Q	M	V	L	C	K	K	D	L	I	R	R	D	I	L	Y	Y	K	G	R	I	D	M	D	K	Y	E	V	I	D	I	E	D	G	R	D	D	D	F	N	V	S	M	K	N	A
Template Known Secondary structure		T												T	T									S	S		T	T										G	G	G								S				S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	L	I	H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I	R	P	D	Y	A	D	S	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	L	H	N	K	E	T	E	E	V	H	L	F	F	A	K	K	L	E	E	K	I	R	W	L	R	A	F	R	E	E	R	K	M	V	Q	E	D	E	K	I	G	F	E
Template Known Secondary structure							S	S	S	S								S	S																									T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D