Job Description Q9R0C8 Confidence 100.00% Date Wed Jul 10 14:10:18 BST 2013 Rank 23 Aligned Residues 301 % Identity 20% Template c1lb1C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa Resolution 2.81 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		Q	P	K	S	Q	E	N	D	I	R	S	C	C	L	A	E	I	R	Q	T	E	E	K	Y	T	E	T	L	E	S	I	E	K	Y	F	M	A	P	L	K	R	.	.	.	.	.	.	.	.	F	L	T	A	A	E	F	D	S	V	F
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	E	E	S	L	A	I	L	R	R	H	V	M	N	E	L	L	D	T	E	R	A	Y	V	E	E	L	L	C	V	L	E	G	Y	A	A	E	M	D	N	P	L	M	A	H	L	I	S	T	G	L	Q	N	K	K	N	I	L	F
Template Known Secondary structure																																				T	T	G	G	G	G		G	G	G	G	G	G	S							T
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	I	P	D	L	V	K	V	H	R	S	L	M	Q	E	I	H	D	S	I	V	N	K	D	D	Q	N	L	Y	Q	V	F	I	N	Y	K	E	R	L	V	I	Y	G	Q	Y	C	S	G	V	E	S	A	I	S	N	L	D	Y	I
Query Conservation
Alig confidence																									.																																				.
Template Conservation																									.																																				.
Template Sequence		G	N	M	E	E	I	Y	H	F	H	N	R	I	F	L	R	E	L	E	S	C	I	D	.	C	P	E	L	V	G	R	C	F	L	E	R	M	E	E	F	Q	I	Y	E	K	Y	C	Q	N	K	P	R	S	E	S	L	W	R	Q	.
Template Known Secondary structure		T	T											T							T	T	S	S	.		G	G	G							T	T	T	T	G	G	G																			.
Template Predicted Secondary structure																									.																																				.
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.		.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	T	K	E	D	V	K	L	K	L	E	E	C	S	K	R	A	N	N	G	K	F	T	L	R	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	H	D	P	M	E	K	A	N	L	K
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		C	S	D	C	P	F	F	Q	E	C	Q	K	K	L	D	.	.	.	.	.	H	K	L	S	L	D	S	Y	L	L	K	P	V	Q	R	I	T	K	Y	Q	L	L	L	K	E	M	L	K	Y	S	K	H	C	E	G	A	E	D	L	Q
Template Known Secondary structure			T	T	S											T	.	.	.	.	.		S	S							T							T	T											T		T	T	S	T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		742	.	.	.	.	.	.	.	750	.	.	.	.	.	.						.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		L	A	L	D	A	M	K	D	L	A	Q	Y	V	N	E	V	K	R	D	N	E	T	L	R	E	I	K	Q	F	Q	L	S	I	E	N	L	N	Q	P	V	L	L	F	G	R	P	Q	G	D	G	E	I	R	I	T	T	L	D	.	.
Query Conservation																																																												.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	S	S	I	L	G	I	L	K	A	V	N	D	S	M	H	L	I	A	I	.	.	.	.	.	.	.	.	.	.	.	T	G	Y	D	G	N	L	G	D	L	G	K	L	L	M	Q	G	S	F	S	V	W	T	D	H	K	K
Template Known Secondary structure																					T	T		.	.	.	.	.	.	.	.	.	.	.				S	S		S	G	G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.												.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.
					414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.										.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	K	H	T	K	Q	E	R	H	I	F	L	F	D	L	A	V	I	V	C	K	R	K	G	D	.	.	.	.	.	.	.	.	.	N	Y	E	M	K	E	I	I	D	L	Q	Q	Y	K	I	A	N	N	P	T	T	D	K	E
Query Conservation		.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																																												.	.
Template Sequence		G	L	A	R	F	K	P	M	Q	R	H	L	F	L	H	E	K	A	V	L	F	C	K	K	R	E	E	N	G	E	G	Y	E	K	A	P	S	Y	S	Y	K	Q	S	L	N	M	T	A	V	G	I	T	E	N	V	K	G	D	.	.
Template Known Secondary structure					S	S	S										S	S												S	S	S	G	G	G	S											G	G	G							B	T	T	B	.	.
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	K	W	S	Y	G	F	Y	L	I	H	T	Q	G	Q	N	G	L	E	F	Y	C	K	T	K	D	L	K	K	K	W	L	E	Q	F	E	M	A	L	S	N	I	R	P	D	Y
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	K	K	F	E	I	W	Y	N	A	R	E	E	V	Y	I	I	Q	A	P	T	P	E	I	K	A	A	W	V	N	E	I	R	K	V	L	T	S	Q	L	Q	A	C
Template Known Secondary structure		.	.	.	.	T	T							G	G	G	T								S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D