332 c1ka6A_ Probab=98.48   E-value=4.1e-07  Score=65.32  Aligned_columns=100  Identities=19%

Q ss_pred             CCCCCCCCCCCCCCCCHHHCCCCC-CCCEEEECCCCCCCCEEEEEECCCCEEEEEE-CCC
Q ss_conf             575557767877310000004688-7622762157788731787606882466652-287
Q batch____       667 YSCQPWYAGPMERLQAETELINRV-NSTYLVRHRTKESGEYAISIKYNNEAKHIKI-LTR  724 (847)
Q Consensus       667 ~~~~~~~~~~~~r~~a~~~l~~~~-~gt~lvr~s~~~~~~~~lS~~~~~~v~~~~i-~~~  724 (847)
                      ....+||.|.++|.+|+..|...+ +|+|++|.+....+.|.+|+...+.+.|++| ...
T Consensus         1 le~~~Wyhg~isr~~Ae~lL~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~   60 (107)
T c1ka6A_           1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTE   60 (107)
T ss_dssp             CCCCSSBCCSCCHHHHHHHHHHHCCTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECT
T ss_pred             CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCEEEEEEEEECC
T ss_conf             987787137889899999984089997699986688887099999879937899999728


Q ss_pred             CCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             87523565-----555576321244457777656666556555677665565
Q batch____       725 DGFFHIAE-----NRKFKSLMELVEYYKHHSLKEGFRTLDTTLQFPYKEPEQ  771 (847)
Q Consensus       725 ~g~~~l~~-----~~~f~s~~~lv~~~~~~s~~~~~~~~~~~~~~~~~~~~~  771 (847)
                      .|.+.+..     ...|+++.+++++|+.++.     ++...+..|....+.
T Consensus        61 ~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~~~-----~l~~~L~~Pv~r~s~  107 (107)
T c1ka6A_          61 TGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ-----GIVIPLQYPVEKKSS  107 (107)
T ss_dssp             TSCEEEECSTTSCCCEESSHHHHHHHTTSSCS-----SSSSCCCSBCCSSCC
T ss_pred             CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCC-----CCCEECCCCCCCCCC
T ss_conf             96499823267786320699999998720889-----831302764245769


