Return to main results Retrieve Phyre Job Id

Job DescriptionQ9CQP2
Confidence6.54%DateWed Jul 10 14:24:44 BST 2013
Rank43Aligned Residues109
% Identity10%Templatec2go51_
PDB info PDB header:translation/rnaChain: 1: PDB Molecule:signal recognition particle receptor alpha PDBTitle: structure of signal recognition particle receptor (sr) in2 complex with signal recognition particle (srp) and3 ribosome nascent chain complex
Resolution7.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  YFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVD
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Template Sequence  FFTIFSKGGLVLWCFQGVSDSCTGPVNA. . . . . . . LIRSVL. . LQETH. . . . . . . . . . . .
Template Known Secondary structure  TTS
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   4.....10.........20.........30. ...... ..40..
 
   66...70.... .....80.........90.. .......100.........110.........120...
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Query Sequence  KFNEWFVSA. FVTAGHMRFIMLHDVRQE. DGIKNFFTDVYDLYIKFAMNPFYEPNSPIRS
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Template Sequence  . . EALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLL
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   50.........60.........70.........80.........90.........100.......
 
   124. ....130.......
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Query Sequence  SA. . . FDRKVQFLGKKH
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Template Sequence  NGTFDFQNDFLRLLREA
Template Known Secondary structure  T




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   108.110.........120....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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