 |
| Job Description | Q9CQP2 | | Confidence | 4.06% | Date | Wed Jul 10 14:24:44 BST 2013 |
| Rank | 54 | Aligned Residues | 26 |
| % Identity | 19% | Template | c4h61A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 6; |
PDBTitle: structure of the schizosaccharomyces pombe mediator subunit med6
|
| Resolution | 2.70 Å |
|
|   |   |
107 | . | . | 110 | . | |
. | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | K | F | A | M | . |
N | P | F | Y | E | P | N | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | I | R | S | S | A | F | D | R | K | V | Q | F |
| Query Conservation |   |
|   |   |
|   | . |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |
|   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Template Sequence |   |
L | E | Y | F | S | Q | S | P | F | Y | S | H | K | S | N | N | E | M | L | K | M | Q | S | Q | F | N | A | L | D | L | G | D | L | N | S | Q | L | K | R |
| Template Known Secondary structure |   |
 |  |  |  |  | T | S | T | T |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|