 |
| Job Description | Q9CQP2 | | Confidence | 3.52% | Date | Wed Jul 10 14:24:44 BST 2013 |
| Rank | 62 | Aligned Residues | 36 |
| % Identity | 14% | Template | c2dvwB_ |
| PDB info |
PDB header:cell cycle/protein-binding | Chain: B: PDB Molecule:26s protease regulatory subunit 6b; |
PDBTitle: structure of the oncoprotein gankyrin in complex with s62 atpase of the 26s proteasome
|
| Resolution | 2.30 Å |
|
|   |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | D | V | Y | D | L | Y | I | K | F | A | M | N | P | F | Y | E | P | N | S | P | I | R | S | S | A | F | D | R | K | V | Q | F | L | G | K |
| Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|
| Template Sequence |   |
A | D | I | N | S | I | C | Q | E | S | G | M | L | A | V | R | E | N | R | Y | I | V | L | A | K | D | F | E | K | A | Y | K | T | V | I | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|