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Job DescriptionQ9CQP2
Confidence61.68%DateWed Jul 10 14:24:44 BST 2013
Rank13Aligned Residues75
% Identity9%Templatec3egdC_
PDB info PDB header:protein transportChain: C: PDB Molecule:vesicle-trafficking protein sec22b; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23a/24a complexed with the snare protein sec22 and bound3 to the transport signal sequence of vesicular stomatitis4 virus glycoprotein
Resolution2.70 Å
Model Dimensions (Å)X:31.538 Y:43.345 Z:27.474

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   62.......70.........80.........90...... ...100.........110.........120
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Query Sequence  KTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIK. NFFTDVYDLYIKFAMNPFYEPNSP
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Template Sequence  RCTLEAGAMTFH. YIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRP
Template Known Secondary structure  TT.TT

BTTS
TTTTTT

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   51........60.. .......70.........80.........90.........100.........
 
   121........130.......
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Query Sequence  IRSSAFDRKVQFLGKKH
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Template Sequence  YSFIEFDTFIQKTKKLY
Template Known Secondary structure  TTTGGGTT
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   110.........120......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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