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Job DescriptionQ9CQP2
Confidence63.68%DateWed Jul 10 14:24:44 BST 2013
Rank11Aligned Residues116
% Identity13%Templatec2dmwA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1
ResolutionUNK
Model Dimensions (Å)X:45.938 Y:35.843 Z:30.268

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY
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Template Sequence  MA. . ILFAVVARGTTILAKHAWCGGN. . . . . . . . . . . . . . FLEVTEQILAKIPSENN. . .
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   8. 10.........20.........30. ........40........
 
   61........70.........80.........90...... ...100.........110.........
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Query Sequence  LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIK. NFFTDVYDLYIKFAMNPFYEPNS
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Template Sequence  . KLTYSHGNYLFH. YICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAPP
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   4950.........60 .........70.........80.........90.........100......
 
   120.........130.......
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Query Sequence  PIRSSAFDRKVQFLGKKH
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Template Sequence  YAMNSEFSSVLAAQLKHH
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   107..110.........120....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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