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Job DescriptionQ9CQP2
Confidence99.96%DateWed Jul 10 14:24:44 BST 2013
Rank6Aligned Residues124
% Identity19%Templatec3cueO_
PDB info PDB header:protein transportChain: O: PDB Molecule:transport protein particle 18 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab ypt1p
Resolution3.70 Å
Model Dimensions (Å)X:46.919 Y:31.860 Z:38.443

  Insertion relative to template
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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  GSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLK
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Template Sequence  GIYSFWIFDRHCNCIFDREWKQ. . . . . . . NEEDAKLLYGMIFSLRSITQKLSKGSVKNDI
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   2.......10.........20... ......30.........40.........50....
 
   63......70.........80.........90.........100.... .....110. .......
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Query Sequence  TVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYD. LYIKFAM. NPFYEPN. .
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Template Sequence  RSISTGKYRVHTYCTASGLWFVLLSDFKQQS. YTQVLQYIYSHIYVKYVSNNLLSPYDFA
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   68.70.........80.........90........ .100.........110.........120......
 
   119120.........130....
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Query Sequence  . . . . . . . . . . . SPIRSSAFDRKVQFLG
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Template Sequence  ENENEMRGQGTRKITNRNFISVLESFL
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   127..130.........140.........150...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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