Return to main results Retrieve Phyre Job Id

Job DescriptionQ9CQP2
Confidence94.32%DateWed Jul 10 14:24:44 BST 2013
Rank7Aligned Residues129
% Identity8%Templatec3kyqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:synaptobrevin homolog ykt6; PDBTitle: lipid-induced conformational switch controls fusion activity of longin2 domain snare ykt6
Resolution2.44 Å
Model Dimensions (Å)X:41.050 Y:44.172 Z:33.409

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSGSFYFVIVG. HHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNM
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Template Sequence  LMKLYSLSVFYKGEPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQL. . . . . . IVERSAK
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Query Sequence  YLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAM. NPFYEPN
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Template Sequence  GSRASVKEQEYLCHVYVRSDSLAGVVIADSEYP. . SRVAFTLLEKVLDEFSKQVDRIDWP
Template Known Secondary structure  T
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   54.....60.........70.........80...... ...90.........100.........110.
 
   119120.........130.......
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Query Sequence  SPIRSSAFDRKVQFLGKKH
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Template Sequence  VGSPATIHYTALDGHLSRY
Template Known Secondary structure  T

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   112.......120.........130
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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